RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 GCNT1Q02742 428 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 PCBP1Q15365 356 aaKnown RBP eCLIP26.76■■□□□ 1.87
CDPF1-201ENST00000314567 SURF1Q15526 300 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 LRRC8DQ7L1W4 858 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 FAM71AQ8IYT1 594 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 TMEM130Q8N3G9 435 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 LRRN4CLQ8ND94 238 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 ZNF516Q92618 1163 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 SEZ6LQ9BYH1 1024 aa26.76■■□□□ 1.87
CDPF1-201ENST00000314567 NXF3Q9H4D5 531 aaKnown RBP26.76■■□□□ 1.87
CDPF1-201ENST00000314567 TRIP11Q15643 1979 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 MGEA5O60502 916 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 TUBB4BP68371 445 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 PAK2Q13177 524 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 IFI16Q16666 785 aaKnown RBP26.75■■□□□ 1.87
CDPF1-201ENST00000314567 OLIG1Q8TAK6 271 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 LNX1Q8TBB1 728 aaPredicted RBP26.75■■□□□ 1.87
CDPF1-201ENST00000314567 CAGE1Q8TC20 777 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 UBXN4Q92575 508 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 KREMEN1Q96MU8 473 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 APOL6Q9BWW8 343 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 PPP1R12CQ9BZL4 782 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 C1orf112Q9NSG2 853 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 RNF19AQ9NV58 838 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 SALL4Q9UJQ4 1053 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 SCN5AQ14524 2016 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 MROH7Q68CQ1 1323 aa26.75■■□□□ 1.87
CDPF1-201ENST00000314567 CAND2O75155 1236 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 H2AFZP0C0S5 128 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 SCARA3Q6AZY7 606 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 TWF2Q6IBS0 349 aaKnown RBP26.74■■□□□ 1.87
CDPF1-201ENST00000314567 H2AFVQ71UI9 128 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 SNTG2Q9NY99 539 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 DCDC2CA8MYV0 355 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 ENC1O14682 589 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 TLR3O15455 904 aaKnown RBP26.74■■□□□ 1.87
CDPF1-201ENST00000314567 SELPP16109 830 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 TNFAIP3P21580 790 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 IBSPP21815 317 aaPredicted RBP26.74■■□□□ 1.87
CDPF1-201ENST00000314567 AXLP30530 894 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 GPNMBQ14956 572 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 SCLYQ96I15 445 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 AGPAT1Q99943 283 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 PACSIN1Q9BY11 444 aa26.74■■□□□ 1.87
CDPF1-201ENST00000314567 TRIM6Q9C030 488 aaPredicted RBP26.74■■□□□ 1.87
CDPF1-201ENST00000314567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.74■■□□□ 1.87
CDPF1-201ENST00000314567 TET1Q8NFU7 2136 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 A0A0A6YYK5 440 aaPredicted RBP26.73■■□□□ 1.87
CDPF1-201ENST00000314567 GPR182O15218 404 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 CCL23P55773 120 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 NAA30Q147X3 362 aaPredicted RBP26.73■■□□□ 1.87
CDPF1-201ENST00000314567 WDR44Q5JSH3 913 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 NECAB2Q7Z6G3 386 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 WDR49Q8IV35 697 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 GLYCTKQ8IVS8 523 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 GOLGA1Q92805 767 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 ELMO3Q96BJ8 720 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 RNF39Q9H2S5 420 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.73■■□□□ 1.87
CDPF1-201ENST00000314567 PCDHGC5Q9Y5F6 944 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 V9GYY5 206 aaPredicted RBP26.73■■□□□ 1.87
CDPF1-201ENST00000314567 CITO14578 2027 aa26.73■■□□□ 1.87
CDPF1-201ENST00000314567 NBNO60934 754 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 HLA-DRAP01903 254 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 PRLRP16471 622 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 AKAP5P24588 427 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 PIK3CAP42336 1068 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 NAP1L1P55209 391 aaKnown RBP26.72■■□□□ 1.87
CDPF1-201ENST00000314567 BIRC3Q13489 604 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 ELF2Q15723 593 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 DCAF4L1Q3SXM0 396 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 TDRD10Q5VZ19 366 aaKnown RBP26.72■■□□□ 1.87
CDPF1-201ENST00000314567 KAT5Q92993 513 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 HIPK3Q9H422 1215 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 RPF1Q9H9Y2 349 aaKnown RBP26.72■■□□□ 1.87
CDPF1-201ENST00000314567 MYH10P35580 1976 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 BFSP2Q13515 415 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 ERCC6LQ2NKX8 1250 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 SLC10A6Q3KNW5 377 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 C1orf53Q5VUE5 145 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 OR5B17Q8NGF7 314 aa26.72■■□□□ 1.87
CDPF1-201ENST00000314567 LACTBL1A8MY62 500 aa26.71■■□□□ 1.87
CDPF1-201ENST00000314567 BUB1O43683 1085 aa26.71■■□□□ 1.87
CDPF1-201ENST00000314567 CLTAP09496 248 aa26.71■■□□□ 1.87
CDPF1-201ENST00000314567 CYP2C18P33260 490 aa26.71■■□□□ 1.87
CDPF1-201ENST00000314567 RSRC2Q7L4I2 434 aaKnown RBP26.71■■□□□ 1.87
CDPF1-201ENST00000314567 SMG8Q8ND04 991 aaKnown RBP26.71■■□□□ 1.87
CDPF1-201ENST00000314567 TOX2Q96NM4 488 aa26.71■■□□□ 1.87
CDPF1-201ENST00000314567 WNT8AQ9H1J5 351 aa26.71■■□□□ 1.87
CDPF1-201ENST00000314567 MEIS3P2A8K0S8 358 aa26.7■■□□□ 1.87
CDPF1-201ENST00000314567 GRM5P41594 1212 aa26.7■■□□□ 1.87
CDPF1-201ENST00000314567 CKAP4Q07065 602 aaKnown RBP26.7■■□□□ 1.87
CDPF1-201ENST00000314567 MTERF4Q7Z6M4 381 aaKnown RBP26.7■■□□□ 1.87
CDPF1-201ENST00000314567 EFCAB13Q8IY85 973 aa26.7■■□□□ 1.87
CDPF1-201ENST00000314567 ACAP3Q96P50 834 aa26.7■■□□□ 1.87
CDPF1-201ENST00000314567 SNX12Q9UMY4 172 aa26.7■■□□□ 1.87
CDPF1-201ENST00000314567 IPPQ9Y573 584 aa26.7■■□□□ 1.87
CDPF1-201ENST00000314567 EPS8L1Q8TE68 723 aa26.7■■□□□ 1.86
CDPF1-201ENST00000314567 KLK14Q9P0G3 267 aa26.7■■□□□ 1.86
CDPF1-201ENST00000314567 TMEM253P0C7T8 217 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms