RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 STAU1O95793 577 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 ALDH2P05091 517 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 CA3P07451 260 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 OR1G1P47890 313 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 BIRC3Q13489 604 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 NCOA4Q13772 614 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 RAB30Q15771 203 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 EPC2Q52LR7 807 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 DCLRE1AQ6PJP8 1040 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 KCNT2Q6UVM3 1135 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 SLC39A11Q8N1S5 342 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 C3orf58Q8NDZ4 430 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 XYLT2Q9H1B5 865 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 VPS16Q9H269 839 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 CITO14578 2027 aa13.64□□□□□ -0.23
CHMP2A-201ENST00000312547 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 GTPBP10A4D1E9 387 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 F8W810 466 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 SPTLC1O15269 473 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 PHACTR2O75167 634 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 KIF4AO95239 1232 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 EFEMP2O95967 443 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 HLA-DRAP01903 254 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 ITGB1P05556 798 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 PAX3P23760 479 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 BMPR1AP36894 532 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 PBX3P40426 434 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 MYL6P60660 151 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 FANCCQ00597 558 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 MYL7Q01449 175 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 TAP1Q03518 808 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 COLGALT1Q8NBJ5 622 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 LMO3Q8TAP4 145 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 RABGGTAQ92696 567 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 COLEC11Q9BWP8 271 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 AAASQ9NRG9 546 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-201ENST00000312547 VCANP13611 3396 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 PDCD11Q14690 1871 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 LRRN2O75325 713 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 ASS1P00966 412 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 KRT19P08727 400 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 ATICP31939 592 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 PNPLA4P41247 253 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 LILRA4P59901 499 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 ERVK-21P61565 698 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 TRPC3Q13507 836 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 TAF4BQ92750 862 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 IGSF21Q96ID5 467 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 SAMD11Q96NU1 681 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 PLVAPQ9BX97 442 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 NKX2-4Q9H2Z4 354 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
CHMP2A-201ENST00000312547 CDH23Q9H251 3354 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 NT5C1B-RDH14C9J2C7 533 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 C5orf67F2Z3F1 127 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 TPM2P07951 284 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 DNAJB2P25686 324 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 PPM1AP35813 382 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 TAF6P49848 677 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 KCNMA1Q12791 1236 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 CETN1Q12798 172 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 NR1I3Q14994 352 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 SPOUT1Q5T280 376 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 DPY19L2P1Q6NXN4 242 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 SARM1Q6SZW1 724 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 LIMS2Q7Z4I7 341 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 RNF168Q8IYW5 571 aaPredicted RBP13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 HPDLQ96IR7 371 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 ZNF560Q96MR9 790 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 C17orf80Q9BSJ5 609 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
CHMP2A-201ENST00000312547 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms