RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SCFD2Q8WU76 684 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 MRPL48Q96GC5 212 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TRAF3IP3Q9Y228 551 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PRDM1O75626 825 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PGM1P36871 562 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SERPINB8P50452 374 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 GABPAQ06546 454 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 NFIAQ12857 509 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SPATS1Q496A3 300 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 EFHC2Q5JST6 749 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TTBK2Q6IQ55 1244 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PADI6Q6TGC4 694 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TMEM47Q9BQJ4 181 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 CYP3A43Q9HB55 503 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 GNGT2O14610 69 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 BRD2P25440 801 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 GNA15P30679 374 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ATICP31939 592 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 S100A5P33763 92 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SARSP49591 514 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PEX5P50542 639 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PKN2Q16513 984 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TXNRD1Q16881 649 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PKD1L3Q7Z443 1732 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 GPKOWQ92917 476 aaPredicted RBP eCLIP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 MSTO1Q9BUK6 570 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PCDHA10Q9Y5I2 948 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 KIAA1217Q5T5P2 1943 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 POLBP06746 335 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 FOXO4P98177 505 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TBX2Q13207 712 aaPredicted RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SLC22A9Q8IVM8 553 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SP8Q8IXZ3 490 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TMC2Q8TDI7 906 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ELAC2Q9BQ52 826 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 MRIQ9BWK5 157 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SEPT9Q9UHD8 586 aaPredicted RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 MYO1DO94832 1006 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 RGS2P41220 211 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 AARS2Q5JTZ9 985 aaKnown RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 HORMAD1Q86X24 394 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 HIC2Q96JB3 615 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 RBM15Q96T37 977 aaKnown RBP eCLIP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 PLIN2Q99541 437 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 PRKCIP41743 596 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 KYNUQ16719 465 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 FKBP1CQ5VVH2 108 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF572Q7Z3I7 529 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 ST7Q9NRC1 585 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 GSTA4O15217 222 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SLC22A2O15244 555 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 NMT2O60551 498 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SERPINB5P36952 375 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 ANXA11P50995 505 aaKnown RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SLC18A1P54219 525 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 BCAR1P56945 870 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 GPS1Q13098 491 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 LVRNQ6Q4G3 990 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 TTC30AQ86WT1 665 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 THEM5Q8N1Q8 247 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 TTC30BQ8N4P2 665 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 RBBP8NLQ8NC74 664 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 RBBP8Q99708 897 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 NAGPAQ9UK23 515 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 CHMP2BQ9UQN3 213 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 MRC1P22897 1456 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 OCRLQ01968 901 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 ARCQ7LC44 396 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SRBD1Q8N5C6 995 aaKnown RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 C18orf8Q96DM3 657 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 OSBPL1AQ9BXW6 950 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 KDM1AO60341 852 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 NUDT17P0C025 328 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 COPAP53621 1224 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 USH1GQ495M9 461 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SLC45A4Q5BKX6 768 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF483Q8TF39 744 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 FOPNLQ96NB1 174 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 BHMT2Q9H2M3 363 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 STX18Q9P2W9 335 aaKnown RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SAP30BPQ9UHR5 308 aaKnown RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SIPA1L3O60292 1781 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 FTLP02792 175 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 KRT19P08727 400 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 MYCLP12524 364 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 ETFBP38117 255 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 IFNAR2P48551 515 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 RNASE9P60153 205 aaKnown RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 XKR3Q5GH77 459 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 FSD1LQ9BXM9 530 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 SYBUQ9NX95 663 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 CIDEBQ9UHD4 219 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 AFF2P51816 1311 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 TBC1D4O60343 1298 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 F9P00740 461 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 PTPAQ15257 358 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 Q4G0T1 1027 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms