RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TCEA3O75764 348 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 RAD17O75943 681 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 ATF2P15336 505 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 AMPD1P23109 780 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 RPL13P26373 211 aaKnown RBP19.12■□□□□ 0.65
SPSB4-201ENST00000310546 CETN2P41208 172 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 PABPC4Q13310 644 aaKnown RBP eCLIP19.12■□□□□ 0.65
SPSB4-201ENST00000310546 SLC1A5Q15758 541 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 NCSTNQ92542 709 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 CDK5RAP2Q96SN8 1893 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 CYTH2Q99418 400 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 ACTL7BQ9Y614 415 aa19.12■□□□□ 0.65
SPSB4-201ENST00000310546 TULP1O00294 542 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 C2CD2LO14523 706 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 OPHN1O60890 802 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 HAUS5O94927 633 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 PENKP01210 267 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 STAT3P40763 770 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 MAGEA10P43363 369 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 RHBDL3P58872 404 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 PPP4CP60510 307 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 ZBTB16Q05516 673 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 TRABD2AQ86V40 505 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 RIBC1Q8N443 379 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 MAML1Q92585 1016 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 HAPLN3Q96S86 360 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 SMC6Q96SB8 1091 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 SYT11Q9BT88 431 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 ZNF277Q9NRM2 450 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 SLC4A7Q9Y6M7 1214 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 ATAD5Q96QE3 1844 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 LTBP1Q14766 1721 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 KDM3AQ9Y4C1 1321 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 FOXN3O00409 490 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 GCNT3O95395 438 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 LDHCP07864 332 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 CDK7P50613 346 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 R3HDM1Q15032 1099 aaKnown RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 C1QTNF12Q5T7M4 302 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 PHLDB3Q6NSJ2 640 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 RFWD2Q8NHY2 731 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 MIPOL1Q8TD10 442 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 NMD3Q96D46 503 aaKnown RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 GPR88Q9GZN0 384 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 LRRC19Q9H756 370 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 HEY2Q9UBP5 337 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 CHMP2BQ9UQN3 213 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 FRMPD2Q68DX3 1309 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 PDXKO00764 312 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 ZWINTO95229 277 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 BAG2O95816 211 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 DSG1Q02413 1049 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 STAT4Q14765 748 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 PKN2Q16513 984 aaKnown RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 OLFML2BQ68BL8 750 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 RINLQ6ZS11 566 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 DENND1AQ8TEH3 1009 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 PRR11Q96HE9 360 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 TTC1Q99614 292 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 WNT8AQ9H1J5 351 aa19.11■□□□□ 0.65
SPSB4-201ENST00000310546 FBXO6Q9NRD1 293 aaPredicted RBP19.11■□□□□ 0.65
SPSB4-201ENST00000310546 LRRC37AA6NMS7 1700 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 HNRNPCL1O60812 293 aaKnown RBP19.1■□□□□ 0.65
SPSB4-201ENST00000310546 MUTP22033 750 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 GPC5P78333 572 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 TMEM62Q0P6H9 643 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 SPATA24Q86W54 205 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 AGPAT1Q99943 283 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 FAM118BQ9BPY3 351 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 TRAIPQ9BWF2 469 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 COA1Q9GZY4 146 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 TYW1Q9NV66 732 aaKnown RBP19.1■□□□□ 0.65
SPSB4-201ENST00000310546 TAS2R1Q9NYW7 299 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 NAV1Q8NEY1 1877 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 DESP17661 470 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 IVDP26440 423 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 CPA2P48052 419 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 DPY19L2Q6NUT2 758 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 MARK2Q7KZI7 788 aaKnown RBP19.1■□□□□ 0.65
SPSB4-201ENST00000310546 ZNF75CPQ92670 426 aaPredicted RBP19.1■□□□□ 0.65
SPSB4-201ENST00000310546 FNBP1Q96RU3 617 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 REEP2Q9BRK0 252 aa19.1■□□□□ 0.65
SPSB4-201ENST00000310546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.1■□□□□ 0.65
SPSB4-201ENST00000310546 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.1■□□□□ 0.65
SPSB4-201ENST00000310546 ASTN1O14525 1302 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 UMODL1Q5DID0 1318 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 RSPH10B2B2RC85 870 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 RSPH10BP0C881 870 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 TRIM49P0CI25 452 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 TRIM49CP0CI26 452 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 TROVE2P10155 538 aaKnown RBP eCLIP19.09■□□□□ 0.65
SPSB4-201ENST00000310546 DPEP1P16444 411 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 PIK3CAP42336 1068 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 PSMC6P62333 389 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.09■□□□□ 0.65
SPSB4-201ENST00000310546 CBWD6Q4V339 395 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 CBWD3Q5JTY5 395 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 CBWD5Q5RIA9 395 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 FAM186BQ8IYM0 893 aa19.09■□□□□ 0.65
SPSB4-201ENST00000310546 NSL1Q96IY1 281 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms