RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 L3MBTL3Q96JM7 780 aaPredicted RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 TMEM206Q9H813 350 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 KMT5AQ9NQR1 393 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 GID8Q9NWU2 228 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 STRCQ7RTU9 1775 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 C17orf102A2RUQ5 167 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 FAM187AA6NFU0 413 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 ICAM1P05362 532 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PTPREP23469 700 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 S100A5P33763 92 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 ALCAMQ13740 583 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 TRPM8Q7Z2W7 1104 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 DDX42Q86XP3 938 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS41-202ENST00000310301 CCNYL1Q8N7R7 359 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 RUBCNQ92622 972 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 SNF8Q96H20 258 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PDE5AO76074 875 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PYGLP06737 847 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 CD58P19256 250 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PSMA2P25787 234 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PMLP29590 882 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 SERPINB1P30740 379 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 CHRNA3P32297 505 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 LSP1P33241 339 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 MXI1P50539 228 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 STAT5BP51692 787 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 SNAP25P60880 206 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 NSUN2Q08J23 767 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS41-202ENST00000310301 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 LAMB3Q13751 1172 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 ZBED8Q8IZ13 594 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 THEM5Q8N1Q8 247 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 SPATA4Q8NEY3 305 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 RIN2Q8WYP3 895 aaPredicted RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 AIFM3Q96NN9 605 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 NR1H4Q96RI1 486 aaPredicted RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 WWP1Q9H0M0 922 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 C10orf88Q9H8K7 445 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 ATP6V0A4Q9HBG4 840 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 NOD2Q9HC29 1040 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 COPG1Q9Y678 874 aaKnown RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 ZNF185O15231 689 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 KCNA1Q09470 495 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PDIA2Q13087 525 aaKnown RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 APOBEC3HQ6NTF7 200 aaKnown RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 CYFIP2Q96F07 1278 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 JPH1Q9HDC5 661 aaPredicted RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 NPHS2Q9NP85 383 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 ERAP1Q9NZ08 941 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 SFMBT1Q9UHJ3 866 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.62□□□□□ -1.03
VPS41-202ENST00000310301 ZNF609O15014 1411 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 IRF6O14896 467 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PLA2G4BP0C869 781 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 SMARCA1P28370 1054 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 GPC5P78333 572 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 CDO1Q16878 200 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 LRRC8BQ6P9F7 803 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 C1orf228Q6PIY5 440 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 PI4K2BQ8TCG2 481 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 SLITRK6Q9H5Y7 841 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 DNAJC12Q9UKB3 198 aa8.62□□□□□ -1.03
VPS41-202ENST00000310301 GPR25O00155 361 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 XPO1O14980 1071 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 RASA1P20936 1047 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 CASP1P29466 404 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 SLFN12LQ6IEE8 588 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 CCDC137Q6PK04 289 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 KLRG1Q96E93 195 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 RBM41Q96IZ5 413 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 HIC2Q96JB3 615 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 VPS39Q96JC1 886 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 NLRP4Q96MN2 994 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 P2RX7Q99572 595 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 CCT7Q99832 543 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 IGF2BP3O00425 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS41-202ENST00000310301 TEX33O43247 280 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 AGTP01019 485 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 ANXA13P27216 316 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 CDR2LQ86X02 465 aaPredicted RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 GMCL1P1Q8NEA9 526 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 DNERQ8NFT8 737 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 CD99L2Q8TCZ2 262 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 ALKBH8Q96BT7 664 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 MTBPQ96DY7 904 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 POLD4Q9HCU8 107 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 CNOT8Q9UFF9 292 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 SEPT3Q9UH03 358 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 PCDHA10Q9Y5I2 948 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 HOXA7P31268 230 aaPredicted RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 HADHAP40939 763 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 IRAK1P51617 712 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 BYSLQ13895 437 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 MTF1Q14872 753 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 LRIG3Q6UXM1 1119 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 GALNT4Q8N4A0 578 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 AGR3Q8TD06 166 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms