RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 ACVR2BQ13705 512 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 TAF1BQ53T94 588 aaPredicted RBP16.4■□□□□ 0.22
PGAP3-202ENST00000309862 FAM102BQ5T8I3 360 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 ANO7Q6IWH7 933 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
PGAP3-202ENST00000309862 LRRC8CQ8TDW0 803 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 STK32AQ8WU08 396 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 KIFAP3Q92845 792 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 TDRD3Q9H7E2 651 aaKnown RBP16.4■□□□□ 0.22
PGAP3-202ENST00000309862 NPHS2Q9NP85 383 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 KCND2Q9NZV8 630 aa16.4■□□□□ 0.22
PGAP3-202ENST00000309862 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 PLS3P13797 630 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 SPARCL1Q14515 664 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 CCDC89Q8N998 374 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 C11orf70Q9BRQ4 267 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 OSBPL8Q9BZF1 889 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 DENND2DQ9H6A0 471 aaPredicted RBP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 FBXO28Q9NVF7 368 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 RAB20Q9NX57 234 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 EURLQ9NYK6 297 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 CYP39A1Q9NYL5 469 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 USP20Q9Y2K6 914 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 STARD13Q9Y3M8 1113 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 NEU2Q9Y3R4 380 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 NUMBLQ9Y6R0 609 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 RARRES1P49788 294 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 YARSP54577 528 aaKnown RBP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 NOP14P78316 857 aaKnown RBP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 IRX1P78414 480 aaPredicted RBP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 CAV1Q03135 178 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 MOGSQ13724 837 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 PLA2G4FQ68DD2 849 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 PARD3BQ8TEW8 1205 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 ACSF2Q96CM8 615 aaPredicted RBP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 UBN1Q9NPG3 1134 aa16.39■□□□□ 0.21
PGAP3-202ENST00000309862 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
PGAP3-202ENST00000309862 MAP3K13O43283 966 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 PTDSS1P48651 473 aaKnown RBP16.38■□□□□ 0.21
PGAP3-202ENST00000309862 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
PGAP3-202ENST00000309862 CCDC15Q0P6D6 951 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 MYBPC2Q14324 1141 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 RFWD3Q6PCD5 774 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 SV2AQ7L0J3 742 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 MTDHQ86UE4 582 aaKnown RBP16.38■□□□□ 0.21
PGAP3-202ENST00000309862 AGGF1Q8N302 714 aaeCLIP16.38■□□□□ 0.21
PGAP3-202ENST00000309862 KCTD17Q8N5Z5 321 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 FBXL13Q8NEE6 735 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 KLF6Q99612 283 aaPredicted RBP16.38■□□□□ 0.21
PGAP3-202ENST00000309862 ZNF148Q9UQR1 794 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 GOLGA8RI6L899 631 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 ATF7P17544 494 aaPredicted RBP16.38■□□□□ 0.21
PGAP3-202ENST00000309862 ALDH3A1P30838 453 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 HHATQ5VTY9 493 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 SYDE1Q6ZW31 735 aaPredicted RBP16.38■□□□□ 0.21
PGAP3-202ENST00000309862 ANKMY2Q8IV38 441 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 IL31RAQ8NI17 732 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 SMC6Q96SB8 1091 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 KCNH7Q9NS40 1196 aa16.38■□□□□ 0.21
PGAP3-202ENST00000309862 SPDYE5A6NIY4 337 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 LUC7L3O95232 432 aaKnown RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 VIL1P09327 827 aaKnown RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 TCF4P15884 667 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 PECAM1P16284 738 aaPredicted RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 ATP4AP20648 1035 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 MAN1A1P33908 653 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 KLF1Q13351 362 aaPredicted RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 OTOAQ7RTW8 1153 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 ZBED8Q8IZ13 594 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 DENND1AQ8TEH3 1009 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 ZDHHC15Q96MV8 337 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 DNPEPQ9ULA0 475 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 A6NHS1 94 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 EDF1O60869 148 aaKnown RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 CNGA1P29973 690 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 PSMC4P43686 418 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 CCNG1P51959 295 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 SPP2Q13103 211 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 PARP6Q2NL67 630 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 APBB1IPQ7Z5R6 666 aaPredicted RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 MAIP1Q8WWC4 291 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 SPATS2LQ9NUQ6 558 aaKnown RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 IFNB1P01574 187 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 NSFP46459 744 aaKnown RBP16.37■□□□□ 0.21
PGAP3-202ENST00000309862 ERFP50548 548 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 GPS1Q13098 491 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 UGCGQ16739 394 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 PLEKHG4Q58EX7 1191 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 SPOPLQ6IQ16 392 aa16.37■□□□□ 0.21
PGAP3-202ENST00000309862 LVRNQ6Q4G3 990 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms