RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 FUCA2Q9BTY2 467 aa9.83□□□□□ -0.84
PDE4D-201ENST00000309641 COLEC11Q9BWP8 271 aa9.83□□□□□ -0.84
PDE4D-201ENST00000309641 DNAJC25Q9H1X3 360 aa9.83□□□□□ -0.84
PDE4D-201ENST00000309641 VWA8A3KMH1 1905 aa9.83□□□□□ -0.84
PDE4D-201ENST00000309641 BICDL2A1A5D9 508 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TKTP29401 623 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 RPL9P32969 192 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 LILRA4P59901 499 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 KRT17Q04695 432 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 BFSP1Q12934 665 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 DUOXA2Q1HG44 320 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 RTP2Q5QGT7 225 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 FAM171A1Q5VUB5 890 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TDRD10Q5VZ19 366 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 PLPP4Q5VZY2 271 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TMC7Q7Z402 723 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 MICALL1Q8N3F8 863 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 MICAL1Q8TDZ2 1067 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 MRPL38Q96DV4 380 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 UROC1Q96N76 676 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TCF25Q9BQ70 676 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 MKNK1Q9BUB5 465 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 ZBP1Q9H171 429 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 MMRN2Q9H8L6 949 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TLR9Q9NR96 1032 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 AGAP1Q9UPQ3 857 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TIMM13Q9Y5L4 95 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 BRWD1Q9NSI6 2320 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TMEM189-UBE2V1I3L0A0 370 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 PER2O15055 1255 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 MAPK13O15264 365 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 VNN1O95497 513 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 C4BPAP04003 597 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 KRT19P08727 400 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 EPB41P11171 864 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 PTMSP20962 102 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 GCLMP48507 274 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 RBM10P98175 930 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 SURF1Q15526 300 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 CCDC85BQ15834 202 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 ZSCAN23Q3MJ62 389 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 PRSS55Q6UWB4 352 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 INTS8Q75QN2 995 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 SV2AQ7L0J3 742 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 FILIP1Q7Z7B0 1213 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 RBM23Q86U06 439 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 CEP57Q86XR8 500 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 SYAP1Q96A49 352 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 DDX27Q96GQ7 796 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 ANKRD36BP1Q96IX9 119 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 ENTPD7Q9NQZ7 604 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 CHST7Q9NS84 486 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 SAMSN1Q9NSI8 373 aaKnown RBP9.82□□□□□ -0.84
PDE4D-201ENST00000309641 LZTS1Q9Y250 596 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 NUB1Q9Y5A7 615 aa9.82□□□□□ -0.84
PDE4D-201ENST00000309641 FSCN2O14926 492 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 XPOTO43592 962 aaKnown RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 SOD2P04179 222 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 ERCC5P28715 1186 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 AARSP49588 968 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 UBE3AQ05086 875 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 STX1AQ16623 288 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 SKOR2Q2VWA4 1001 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 ANO6Q4KMQ2 910 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 DCAF17Q5H9S7 520 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 FOXR2Q6PJQ5 311 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 NT5DC4Q86YG4 428 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 CACTINQ8WUQ7 758 aaKnown RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 TSPAN18Q96SJ8 248 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 GAS2L1Q99501 681 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 ANO10Q9NW15 660 aa9.81□□□□□ -0.84
PDE4D-201ENST00000309641 ARMCX3Q9UH62 379 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 PUF60Q9UHX1 559 aaKnown RBP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 SF3B1O75533 1304 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDE4D-201ENST00000309641 C2orf71A6NGG8 1288 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 SLC16A3O15427 465 aaKnown RBP9.8□□□□□ -0.84
PDE4D-201ENST00000309641 ADAM12O43184 909 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 LILRB3O75022 631 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CXCL14O95715 111 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 TNNC2P02585 160 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CTSAP10619 480 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 KRT13P13646 458 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 FOSL2P15408 326 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 RPL17P18621 184 aaKnown RBP9.8□□□□□ -0.84
PDE4D-201ENST00000309641 FGFR3P22607 806 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CA8P35219 290 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CDR1P51861 262 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 MCCD1P59942 119 aaPredicted RBP9.8□□□□□ -0.84
PDE4D-201ENST00000309641 MYL6P60660 151 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 BIRC3Q13489 604 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 PTPN14Q15678 1187 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 ZACNQ401N2 412 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CCDC40Q4G0X9 1142 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CBWD6Q4V339 395 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 TCEAL5Q5H9L2 206 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CBWD3Q5JTY5 395 aa9.8□□□□□ -0.84
PDE4D-201ENST00000309641 CBWD5Q5RIA9 395 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms