RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 H3BNC9 293 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 RFXAPO00287 272 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 TADA2AO75478 443 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 C4BPAP04003 597 aaKnown RBP13.91□□□□□ -0.18
APTX-201ENST00000309615 KRT19P08727 400 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 LRSAM1Q6UWE0 723 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 TRIM59Q8IWR1 403 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 TMEM169Q96HH4 297 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 FAM161BQ96MY7 647 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 AGAP1Q9UPQ3 857 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 CARNS1A5YM72 827 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 TMEM189-UBE2V1I3L0A0 370 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 I3L4J1 428 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 GRM6O15303 877 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 AP3M2P53677 418 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 BIRC3Q13489 604 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 ZACNQ401N2 412 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 ZNF697Q5TEC3 545 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 SV2AQ7L0J3 742 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 GDPD5Q8WTR4 605 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 GPR62Q9BZJ7 368 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 HSD3B7Q9H2F3 369 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 CBX8Q9HC52 389 aa13.91□□□□□ -0.18
APTX-201ENST00000309615 SPTLC1O15269 473 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 PHACTR2O75167 634 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
APTX-201ENST00000309615 DNAJB1P25685 340 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 BRCC3P46736 316 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 FXR1P51114 621 aaKnown RBP eCLIP13.9□□□□□ -0.18
APTX-201ENST00000309615 LILRA4P59901 499 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 RBP5P82980 135 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 KRT17Q04695 432 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 GPM6BQ13491 265 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 IQCB1Q15051 598 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 C15orf39Q6ZRI6 1047 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 SPPL3Q8TCT6 385 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 TSPY26PQ9H489 355 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 NUB1Q9Y5A7 615 aa13.9□□□□□ -0.18
APTX-201ENST00000309615 KCNJ18B7U540 433 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 CSPG5O95196 566 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 VNN1O95497 513 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 EFEMP2O95967 443 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 GTF2H1P32780 548 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 ZNF445P59923 1031 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 KCNJ12Q14500 433 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 CBWD6Q4V339 395 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 TCP11X2Q5H9J9 407 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 CBWD3Q5JTY5 395 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 CBWD5Q5RIA9 395 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 FUT10Q6P4F1 479 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 Q7L0L9 218 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 TAS1R1Q7RTX1 841 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 DDX53Q86TM3 631 aaKnown RBP13.89□□□□□ -0.19
APTX-201ENST00000309615 LUZP1Q86V48 1076 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 TMEM8AQ9HCN3 771 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 MAGEC2Q9UBF1 373 aaPredicted RBP13.89□□□□□ -0.19
APTX-201ENST00000309615 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.89□□□□□ -0.19
APTX-201ENST00000309615 STX10O60499 249 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 LPXNO60711 386 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 CAVIN2O95810 425 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 MTIF2P46199 727 aaKnown RBP13.89□□□□□ -0.19
APTX-201ENST00000309615 AARSP49588 968 aaKnown RBP eCLIP13.89□□□□□ -0.19
APTX-201ENST00000309615 CAMK1Q14012 370 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 KRT39Q6A163 491 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 GPR153Q6NV75 609 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 LRRC52Q8N7C0 313 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 TAS1R2Q8TE23 839 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 POF1BQ8WVV4 589 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
APTX-201ENST00000309615 SF3B1O75533 1304 aaKnown RBP eCLIP13.89□□□□□ -0.195e-11■■■■■ 34.5
APTX-201ENST00000309615 SMTNL1A8MU46 457 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 BECN2A8MW95 431 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 LRRN2O75325 713 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 ZNF18P17022 549 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 FMO5P49326 533 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 TAF6P49848 677 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 MXI1P50539 228 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 MYL6P60660 151 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 KCNH2Q12809 1159 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 TRPC3Q13507 836 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 NCOA4Q13772 614 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 RNF168Q8IYW5 571 aaPredicted RBP13.88□□□□□ -0.19
APTX-201ENST00000309615 HPDLQ96IR7 371 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 ZNF560Q96MR9 790 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 XYLT2Q9H1B5 865 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.192e-7■■■■■ 86.5
APTX-201ENST00000309615 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
APTX-201ENST00000309615 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
APTX-201ENST00000309615 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
APTX-201ENST00000309615 PLXNA4Q9HCM2 1894 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms