RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 CFAP221Q4G0U5 840 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 PLPPR4Q7Z2D5 763 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 TMEM40Q8WWA1 233 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 GAD1Q99259 594 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 CELF4Q9BZC1 486 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 PPP1R12CQ9BZL4 782 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 RBM12Q9NTZ6 932 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 A0A0C4DFX4 3053 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 F5H423 210 aaPredicted RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 M0QYV0 167 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 CPT1AP50416 773 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 VSNL1P62760 191 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 KCNT1Q5JUK3 1230 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 ZNF484Q5JVG2 852 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 OR6B2Q6IFH4 312 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■■□ 25.4
LCLAT1-201ENST00000309052 CEP57Q86XR8 500 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 ZNF564Q8TBZ8 553 aaPredicted RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 AIPL1Q9NZN9 384 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 PQBP1O60828 265 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 TADA3O75528 432 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 RNASELQ05823 741 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 CRELD2Q6UXH1 353 aaPredicted RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 MED10Q9BTT4 135 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 SELENOOQ9BVL4 669 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 EPB41L5Q9HCM4 733 aa9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 NGRNQ9NPE2 291 aaKnown RBP9.18□□□□□ -0.94
LCLAT1-201ENST00000309052 GRID2IPA4D2P6 1211 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 A8MXQ7 604 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ITGA4P13612 1032 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 NOGQ13253 232 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 SMAD1Q15797 465 aaKnown RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 KCNA10Q16322 511 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ZACNQ401N2 412 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 COBLL1Q53SF7 1204 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 LRRN4Q8WUT4 740 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 KRT35Q92764 455 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 RUFY1Q96T51 708 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 PNKPQ96T60 521 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 NTPCRQ9BSD7 190 aaKnown RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 KIAA1586Q9HCI6 787 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 TJP2Q9UDY2 1190 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 AMACRQ9UHK6 382 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 DMGDHQ9UI17 866 aaKnown RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ALG6Q9Y672 507 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 SBF1O95248 1867 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 TLDC2A0PJX2 215 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 CA12O43570 354 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 GPC5P78333 572 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 TARBP2Q15633 366 aaKnown RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 HP1BP3Q5SSJ5 553 aaPredicted RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 GSTA5Q7RTV2 222 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 TLR10Q9BXR5 811 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 IFT122Q9HBG6 1241 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 TUBGCP4Q9UGJ1 667 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 SNX12Q9UMY4 172 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 TRIP12Q14669 1992 aaPredicted RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 EFCAB8A8MWE9 144 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 SLC26A4O43511 780 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ATG7O95352 703 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 COMTP21964 271 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 CKAP4Q07065 602 aaKnown RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ATP13A4Q4VNC1 1196 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 HSP90B2PQ58FF3 399 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 DEFB128Q7Z7B8 93 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ERICH1Q86X53 443 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 CCDC105Q8IYK2 499 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 NETO2Q8NC67 525 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 GLT1D1Q96MS3 346 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 APBA2Q99767 749 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 CCDC113Q9H0I3 377 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 CD52P31358 61 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 CACNB2Q08289 660 aaPredicted RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 TRADDQ15628 312 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 C1orf54Q8WWF1 131 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 BORCS6Q96GS4 357 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ABCB6Q9NP58 842 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 DPP3Q9NY33 737 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 CGNQ9P2M7 1197 aaKnown RBP9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 HMGXB4Q9UGU5 601 aa9.17□□□□□ -0.94
LCLAT1-201ENST00000309052 ERICH4A6NGS2 130 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 MBTD1Q05BQ5 628 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 BRSK2Q8IWQ3 736 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 SPATA4Q8NEY3 305 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 ZNF606Q8WXB4 792 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 TRPV6Q9H1D0 765 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 MORF4L1Q9UBU8 362 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 CDY2AQ9Y6F7 541 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 ERLIN1O75477 346 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 HEXIM1O94992 359 aaKnown RBP9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 VNN1O95497 513 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 SLC26A2P50443 739 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 CCL23P55773 120 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 C17orf99Q6UX52 265 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 SLC9A9Q8IVB4 645 aa9.16□□□□□ -0.94
LCLAT1-201ENST00000309052 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms