RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 CERS5Q8N5B7 392 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 RBM46Q8TBY0 533 aaKnown RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 FNBP1Q96RU3 617 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 TRIM51Q9BSJ1 452 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 GLT8D2Q9H1C3 349 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ISCUQ9H1K1 167 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 NEUROG2Q9H2A3 272 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 SERPINB13Q9UIV8 391 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 SSU72P8A0A1W2PR75 194 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 E7ENQ6 273 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 APOEP02649 317 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 PMS2P54278 862 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 OXCT1P55809 520 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 MMEL1Q495T6 779 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ASPRV1Q53RT3 343 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 MEI1Q5TIA1 1274 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 CATSPER3Q86XQ3 398 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 SRRM1Q8IYB3 904 aaKnown RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 FAM13CQ8NE31 585 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 HSPBAP1Q96EW2 488 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ZNF277Q9NRM2 450 aaPredicted RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 TMEM120BA0PK00 339 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 CASQ2O14958 399 aaPredicted RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 HAUS5O94927 633 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 PRLRP16471 622 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 KRT15P19012 456 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 FGFR4P22455 802 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 RPL13P26373 211 aaKnown RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 RALGDSQ12967 914 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ATP1A4Q13733 1029 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 AOC3Q16853 763 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 KIAA2013Q8IYS2 634 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ZNF184Q99676 751 aaPredicted RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 REEP2Q9BRK0 252 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 TMEM98Q9Y2Y6 226 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 DCTN3O75935 186 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 GDF11O95390 407 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ZBED2Q9BTP6 218 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 PCDHA2Q9Y5H9 948 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 MYH1P12882 1939 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 A0A0G2JND7 137 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ESYT2A0FGR8 921 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ZBTB5O15062 677 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 AKAP3O75969 853 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 GCNT3O95395 438 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 LYNP07948 512 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 UCHL3P15374 230 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 HOXA10P31260 410 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ITIH3Q06033 890 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ARHGEF18Q6ZSZ5 1173 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 TRIML2Q8N7C3 387 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 GIPC3Q8TF64 312 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-201ENST00000308259 GANQ9H2C0 597 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 PENKP01210 267 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-201ENST00000308259 SHMT1P34896 483 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 SLC29A2Q14542 456 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 KIF22Q14807 665 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ARHGEF6Q15052 776 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ZC2HC1CQ53FD0 456 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-201ENST00000308259 VPS36Q86VN1 386 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 DDHD1Q8NEL9 900 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 BHMTQ93088 406 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 TBC1D10AQ9BXI6 508 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ANO3Q9BYT9 981 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 BHMT2Q9H2M3 363 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 OSGEPQ9NPF4 335 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ARMCX3Q9UH62 379 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ASB3Q9Y575 518 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 CCDC88AQ3V6T2 1871 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 C5orf60A6NFR6 353 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 HOXD13P35453 343 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 PHEXP78562 749 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 DSG1Q02413 1049 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 COG2Q14746 738 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 TMEM214Q6NUQ4 689 aaKnown RBP11.05□□□□□ -0.64
MSRB3-201ENST00000308259 ALKBH5Q6P6C2 394 aaKnown RBP11.05□□□□□ -0.64
MSRB3-201ENST00000308259 FITM2Q8N6M3 262 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 CEP295NLQ96MC4 621 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 MOSPD1Q9UJG1 213 aa11.05□□□□□ -0.64
MSRB3-201ENST00000308259 DDX60LQ5H9U9 1706 aaKnown RBP11.04□□□□□ -0.64
MSRB3-201ENST00000308259 SPAG7O75391 227 aa11.04□□□□□ -0.64
MSRB3-201ENST00000308259 UNC5CO95185 931 aa11.04□□□□□ -0.64
MSRB3-201ENST00000308259 EXOC3L4Q17RC7 722 aa11.04□□□□□ -0.64
MSRB3-201ENST00000308259 FLCNQ8NFG4 579 aa11.04□□□□□ -0.64
MSRB3-201ENST00000308259 ASAP3Q8TDY4 903 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms