RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 IRAK3Q9Y616 596 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 C2orf71A6NGG8 1288 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 HIDE1A8MVS5 230 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SYN3O14994 580 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PER2O15055 1255 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SLC34A2O95436 690 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ITGB3P05106 788 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ADH1AP07327 375 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 EPB41P11171 864 aaKnown RBP11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CCNE1P24864 410 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PSMC2P35998 433 aaKnown RBP11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PNPLA4P41247 253 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TAF6P49848 677 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 WNT7BP56706 349 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 HYAL1Q12794 435 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PAK1Q13153 545 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ADAM9Q13443 819 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DUSP6Q16828 381 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DUOXA2Q1HG44 320 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SV2CQ496J9 727 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 C9orf57Q5W0N0 161 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ELMSAN1Q6PJG2 1045 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PPFIBP1Q86W92 1011 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 GPR65Q8IYL9 337 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 FAM186BQ8IYM0 893 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MRPL43Q8N983 215 aaKnown RBP11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 APPL2Q8NEU8 664 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 HLA-CQ95604 372 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CCDC127Q96BQ5 260 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PABPC5Q96DU9 382 aaKnown RBP11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 INTS13Q9NVM9 706 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DMAC2Q9NW81 257 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CHD7Q9P2D1 2997 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 THEGQ9P2T0 379 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DACH1Q9UI36 760 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 COG5Q9UP83 839 aa11.88□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CHD9Q3L8U1 2897 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 I3L4J1 428 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MAPK13O15264 365 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PHACTR2O75167 634 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ODC1P11926 461 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 KLRC2P26717 231 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TKTP29401 623 aaKnown RBP11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CASP4P49662 377 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 AP3M2P53677 418 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 FKBP3Q00688 224 aaKnown RBP11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 BFSP1Q12934 665 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PSMD5Q16401 504 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ZCWPW2Q504Y3 356 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 RTP2Q5QGT7 225 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LLGL2Q6P1M3 1020 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ANKS3Q6ZW76 656 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 INTS8Q75QN2 995 aaKnown RBP11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TAS1R1Q7RTX1 841 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CSGALNACT2Q8N6G5 542 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 EFHBQ8N7U6 833 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 C1orf127Q8N9H9 656 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PIK3R5Q8WYR1 880 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CASP10Q92851 521 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SYAP1Q96A49 352 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SUSD3Q96L08 255 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 B3GALT6Q96L58 329 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MFSD14AQ96MC6 490 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MKNK1Q9BUB5 465 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 UBE2ZQ9H832 354 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CHST7Q9NS84 486 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ANO9A1A5B4 782 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TRIM49BA6NDI0 452 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 H7C4K7 107 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PIRO00625 290 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PPEF2O14830 753 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CLASP2O75122 1294 aaKnown RBP11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 FGFR1OPO95684 399 aaKnown RBP11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 EFEMP2O95967 443 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 FGFR3P22607 806 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 GTF2F1P35269 517 aaKnown RBP eCLIP11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 VAMP7P51809 220 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 RBP5P82980 135 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MYO1EQ12965 1108 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 BIRC3Q13489 604 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TRPC3Q13507 836 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 AAK1Q2M2I8 961 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CCDC183Q5T5S1 534 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 KIAA0319Q5VV43 1072 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ZNF280DQ6N043 979 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PRSS55Q6UWB4 352 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 GLYCTKQ8IVS8 523 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TMEM130Q8N3G9 435 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 OR5B17Q8NGF7 314 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TMC2Q8TDI7 906 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 KLHL5Q96PQ7 755 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms