RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 EHBP1Q8NDI1 1231 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 BEST2Q8NFU1 509 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 TATDN2Q93075 761 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 RNPC3Q96LT9 517 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 RPS6KC1Q96S38 1066 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 RAD9AQ99638 391 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 PI4K2AQ9BTU6 479 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 VRTNQ9H8Y1 702 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 MARCH5Q9NX47 278 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 RAB20Q9NX57 234 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 AJAP1Q9UKB5 411 aaPredicted RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 ITGA11Q9UKX5 1188 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 AGAP1Q9UPQ3 857 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 MRPL42Q9Y6G3 142 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 SCN1AP35498 2009 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 TDRD15B5MCY1 1934 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 NRP1O14786 923 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 STAU1O95793 577 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 SERPINC1P01008 464 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 TMEM191BP0C7N4 346 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 PBX2P40425 430 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 LILRA4P59901 499 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 MYL7Q01449 175 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 NCOA4Q13772 614 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 TRIM65Q6PJ69 517 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 FBXL13Q8NEE6 735 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 URGCPQ8TCY9 931 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 CACTINQ8WUQ7 758 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 CLP1Q92989 425 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 ANKRD36BP1Q96IX9 119 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 VN1R3Q9BXE9 311 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 SLC38A7Q9NVC3 462 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 INSL6Q9Y581 213 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 PDE4DIPQ5VU43 2346 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 A0A1W2PQC6 194 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 GOLGA6L3A6NEY3 463 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 NT5C1B-RDH14C9J2C7 533 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 TMEM189-UBE2V1I3L0A0 370 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 PODXLO00592 558 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 STX10O60499 249 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 KIF4AO95239 1232 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 TNNC2P02585 160 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 RPL9P32969 192 aaKnown RBP10.22□□□□□ -0.77
RFX3-201ENST00000302303 ZNF75DP51815 510 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 BCAR1P56945 870 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 TPM4P67936 248 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 RBP5P82980 135 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 UBXN1Q04323 297 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 BTG3Q14201 252 aaPredicted RBP10.22□□□□□ -0.77
RFX3-201ENST00000302303 SYCP1Q15431 976 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 GJB7Q6PEY0 223 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 USP37Q86T82 979 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 ARHGEF19Q8IW93 802 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 RNF168Q8IYW5 571 aaPredicted RBP10.22□□□□□ -0.77
RFX3-201ENST00000302303 ABI1Q8IZP0 508 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 LRRC43Q8N309 656 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 LRRC52Q8N7C0 313 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 KAT5Q92993 513 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 KREMEN1Q96MU8 473 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 YME1L1Q96TA2 773 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 NAA15Q9BXJ9 866 aaKnown RBP10.22□□□□□ -0.77
RFX3-201ENST00000302303 MRPL9Q9BYD2 267 aaKnown RBP10.22□□□□□ -0.77
RFX3-201ENST00000302303 TTYH3Q9C0H2 523 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 INTS2Q9H0H0 1204 aaKnown RBP10.22□□□□□ -0.77
RFX3-201ENST00000302303 SDCBP2Q9H190 292 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 GANQ9H2C0 597 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.22□□□□□ -0.77
RFX3-201ENST00000302303 NME7Q9Y5B8 376 aa10.22□□□□□ -0.77
RFX3-201ENST00000302303 CDH23Q9H251 3354 aa10.21□□□□□ -0.77
RFX3-201ENST00000302303 LINC01553A4QN01 128 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.78
RFX3-201ENST00000302303 TLL1O43897 1013 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 N4BP1O75113 896 aaKnown RBP10.21□□□□□ -0.78
RFX3-201ENST00000302303 ALDH2P05091 517 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 BRCC3P46736 316 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 BIRC3Q13489 604 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 EXOC3L4Q17RC7 722 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 SGSM1Q2NKQ1 1148 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 TIGD5Q53EQ6 642 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 KLHDC7AQ5VTJ3 777 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 DCLRE1AQ6PJP8 1040 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 KCNT2Q6UVM3 1135 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 CHRDL2Q6WN34 429 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 GBP6Q6ZN66 633 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 TDHQ8IZJ6 230 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 UBR7Q8N806 425 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.78
RFX3-201ENST00000302303 HPDLQ96IR7 371 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 UROC1Q96N76 676 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 ARID3AQ99856 593 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 TMEM175Q9BSA9 504 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 PBX4Q9BYU1 374 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 GPR62Q9BZJ7 368 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 GPR88Q9GZN0 384 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 PLCB1Q9NQ66 1216 aa10.21□□□□□ -0.78
RFX3-201ENST00000302303 GDAP2Q9NXN4 497 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms