RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 MSANTD4Q8NCY6 345 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 ZNF668Q96K58 619 aaPredicted RBP12.86□□□□□ -0.35
TPM3-202ENST00000302206 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 NIF3L1Q9GZT8 377 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 FAM124BQ9H5Z6 455 aaPredicted RBP12.86□□□□□ -0.35
TPM3-202ENST00000302206 ABCB6Q9NP58 842 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 SEPT11Q9NVA2 429 aaKnown RBP12.86□□□□□ -0.35
TPM3-202ENST00000302206 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 NUB1Q9Y5A7 615 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 A0A0C4DFX4 3053 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 COL6A3P12111 3177 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 C17orf102A2RUQ5 167 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
TPM3-202ENST00000302206 SRGAP2O75044 1071 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 CYP1A2P05177 515 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 MMEP08473 750 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 DARSP14868 501 aaKnown RBP12.85□□□□□ -0.35
TPM3-202ENST00000302206 ATICP31939 592 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
TPM3-202ENST00000302206 RPS6KA1Q15418 735 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 SPOPLQ6IQ16 392 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 ACAD10Q6JQN1 1059 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 C11orf63Q6NUN7 778 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 EFCAB13Q8IY85 973 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 TRPV1Q8NER1 839 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 CAGE1Q8TC20 777 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 TRIM11Q96F44 468 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 PBKQ96KB5 322 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 TSPAN18Q96SJ8 248 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 MMS19Q96T76 1030 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 MTG1Q9BT17 334 aaPredicted RBP12.85□□□□□ -0.35
TPM3-202ENST00000302206 VRTNQ9H8Y1 702 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 PLEKHA5Q9HAU0 1116 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM3-202ENST00000302206 ARGLU1Q9NWB6 273 aaPredicted RBP12.85□□□□□ -0.35
TPM3-202ENST00000302206 GTF3C4Q9UKN8 822 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 STXBP5LQ9Y2K9 1186 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 DERAQ9Y315 318 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 C2CD2Q9Y426 696 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 NR2E3Q9Y5X4 410 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 MYH10P35580 1976 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 MROH7Q68CQ1 1323 aa12.85□□□□□ -0.35
TPM3-202ENST00000302206 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 SEPT4O43236 478 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 NCK2O43639 380 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 KIF4AO95239 1232 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 STAU1O95793 577 aaKnown RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 FTCDO95954 541 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 CST3P01034 146 aaPredicted RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 CYP1A1P04798 512 aaPredicted RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 RPLP2P05387 115 aaKnown RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 CXCL8P10145 99 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 MYBL1P10243 752 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 UNGP13051 313 aaPredicted RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 PAFAH1B1P43034 410 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 MYL6P60660 151 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 CFAP221Q4G0U5 840 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 TAF3Q5VWG9 929 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 TAF2Q6P1X5 1199 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 CEP120Q8N960 986 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 RBBP8NLQ8NC74 664 aaPredicted RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 RUBCNQ92622 972 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 LENG1Q96BZ8 264 aaPredicted RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 ARHGEF26Q96DR7 871 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 CPB2Q96IY4 423 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 ACAP3Q96P50 834 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 ARID3AQ99856 593 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 THAP2Q9H0W7 228 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 SPC25Q9HBM1 224 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 AVENQ9NQS1 362 aaPredicted RBP12.84□□□□□ -0.35
TPM3-202ENST00000302206 UVRAGQ9P2Y5 699 aa12.84□□□□□ -0.35
TPM3-202ENST00000302206 RALGAPA2Q2PPJ7 1873 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 A0A1W2PPC1 479 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 PDE2AO00408 941 aaPredicted RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 GNRH1P01148 92 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 ABCB4P21439 1286 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 EIF4BP23588 611 aaKnown RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 HOXA11P31270 313 aaPredicted RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 FLT3LGP49771 235 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 PRMT2P55345 433 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 BEX3Q00994 111 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 BRD3Q15059 726 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 KIZQ2M2Z5 673 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 ZNF699Q32M78 642 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 SLC10A6Q3KNW5 377 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms