RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 ALG13Q9NP73 1137 aaKnown RBP20.34■□□□□ 0.85
TSR1-201ENST00000301364 NPHS2Q9NP85 383 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 RAB6BQ9NRW1 208 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 XPO7Q9UIA9 1087 aaKnown RBP20.34■□□□□ 0.85
TSR1-201ENST00000301364 ZNRF3Q9ULT6 936 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 AKAP3O75969 853 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 HMGCS2P54868 508 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 PRKCEQ02156 737 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 DNAL1Q4LDG9 190 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 SLC10A4Q96EP9 437 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 NRBF2Q96F24 287 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 KIF12Q96FN5 646 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 OLFML3Q9NRN5 406 aa20.34■□□□□ 0.85
TSR1-201ENST00000301364 DNAJC8O75937 253 aaPredicted RBP20.33■□□□□ 0.85
TSR1-201ENST00000301364 RALAP11233 206 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 GNAT1P11488 350 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 HIC1Q14526 733 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 MORF4L2Q15014 288 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 SEPT1Q8WYJ6 367 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 RSAD1Q9HA92 442 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 RASSF10A6NK89 507 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 GSTA4O15217 222 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 SASH3O75995 380 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 ITIH4Q14624 930 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 MTHFD1LQ6UB35 978 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 ZNF560Q96MR9 790 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 EHD4Q9H223 541 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 UNC45AQ9H3U1 944 aa20.33■□□□□ 0.85
TSR1-201ENST00000301364 F8VZ95 297 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 KIF19Q2TAC6 998 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 C3orf62Q6ZUJ4 267 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 RASSF3Q86WH2 238 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 CCNYL1Q8N7R7 359 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 TTC8Q8TAM2 541 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 IL17RBQ9NRM6 502 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 GTSE1Q9NYZ3 720 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 PAK5Q9P286 719 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 MTO1Q9Y2Z2 717 aaKnown RBP20.33■□□□□ 0.84
TSR1-201ENST00000301364 C19orf81C9J6K1 198 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 PJA2O43164 708 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 PSTPIP1O43586 416 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 APRTP07741 180 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 STAMBPL1Q96FJ0 436 aa20.33■□□□□ 0.84
TSR1-201ENST00000301364 RBP5P82980 135 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 NFX1Q12986 1120 aaKnown RBP20.32■□□□□ 0.84
TSR1-201ENST00000301364 KIF22Q14807 665 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 PID1Q7Z2X4 250 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 LONP2Q86WA8 852 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 LRRC34Q8IZ02 419 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 VGLL2Q8N8G2 317 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 ACAP3Q96P50 834 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 FRMD8Q9BZ67 464 aaPredicted RBP20.32■□□□□ 0.84
TSR1-201ENST00000301364 CACYBPQ9HB71 228 aaKnown RBP20.32■□□□□ 0.84
TSR1-201ENST00000301364 WHRNQ9P202 907 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 TNIP3Q96KP6 325 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 OLFM3Q96PB7 478 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 TRAF3IP3Q9Y228 551 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 ELF1P32519 619 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 AARSP49588 968 aaKnown RBP eCLIP20.32■□□□□ 0.841e-12■■■□□ 14.6
TSR1-201ENST00000301364 ZNF668Q96K58 619 aaPredicted RBP20.32■□□□□ 0.84
TSR1-201ENST00000301364 NIF3L1Q9GZT8 377 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 MAP2K7O14733 419 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 ZC3H11AO75152 810 aaKnown RBP eCLIP20.32■□□□□ 0.84
TSR1-201ENST00000301364 GTF2H1P32780 548 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 LRRC23Q53EV4 343 aaPredicted RBP20.32■□□□□ 0.84
TSR1-201ENST00000301364 THEM5Q8N1Q8 247 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 SLC26A7Q8TE54 656 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 UBN1Q9NPG3 1134 aa20.32■□□□□ 0.84
TSR1-201ENST00000301364 PPARGP37231 505 aaPredicted RBP20.31■□□□□ 0.84
TSR1-201ENST00000301364 ZNF720Q7Z2F6 126 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 GMCL1Q96IK5 515 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 TLR10Q9BXR5 811 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 MGEA5O60502 916 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 STX3Q13277 289 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 TWF2Q6IBS0 349 aaKnown RBP20.31■□□□□ 0.84
TSR1-201ENST00000301364 ICA1LQ8NDH6 482 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 TTC36A6NLP5 189 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 PIK3R2O00459 728 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 CST8O60676 142 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 EEF1B2P24534 225 aaKnown RBP20.31■□□□□ 0.84
TSR1-201ENST00000301364 ADORA2BP29275 332 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 PHEXP78562 749 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 PTK7Q13308 1070 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 GIPC2Q8TF65 315 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 AGAP1Q9UPQ3 857 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 DCCP43146 1447 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 AP3B1O00203 1094 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 SLC12A1Q13621 1099 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 TXNRD3Q86VQ6 643 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 PPIL6Q8IXY8 311 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 FBXO25Q8TCJ0 367 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 PNMA5Q96PV4 448 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 CYP4F11Q9HBI6 524 aa20.31■□□□□ 0.84
TSR1-201ENST00000301364 ASB14A6NK59 587 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 SNRPAP09012 282 aaKnown RBP20.3■□□□□ 0.84
TSR1-201ENST00000301364 RBP3P10745 1247 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 CYB5D1Q6P9G0 228 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 RBM46Q8TBY0 533 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms