RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CCDC89Q8N998 374 aa15.54■□□□□ 0.08
COL6A2-201ENST00000300527 C7orf43Q8WVR3 580 aa15.54■□□□□ 0.08
COL6A2-201ENST00000300527 TTC17Q96AE7 1141 aa15.54■□□□□ 0.08
COL6A2-201ENST00000300527 FAM20AQ96MK3 541 aa15.54■□□□□ 0.08
COL6A2-201ENST00000300527 PYGLP06737 847 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 FGFR1P11362 822 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 SERPINB3P29508 390 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 DYNLT1P63172 113 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 PDIA2Q13087 525 aaKnown RBP15.53■□□□□ 0.08
COL6A2-201ENST00000300527 GRAPQ13588 217 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 ACVR2BQ13705 512 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 C4orf50Q6ZRC1 276 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 CBWD2Q8IUF1 395 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 SLC25A41Q8N5S1 370 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 CFAP61Q8NHU2 1237 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 LMO3Q8TAP4 145 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 GRAPLQ8TC17 118 aaPredicted RBP15.53■□□□□ 0.08
COL6A2-201ENST00000300527 C10orf82Q8WW14 230 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 PSPC1Q8WXF1 523 aaKnown RBP15.53■□□□□ 0.08
COL6A2-201ENST00000300527 MAML1Q92585 1016 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 INPP5DQ92835 1189 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 ZNF333Q96JL9 665 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 GTF3C4Q9UKN8 822 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 NUMBLQ9Y6R0 609 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 MAP3K7O43318 606 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 NT5C2P49902 561 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 ARSEP51690 589 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 DOK7Q18PE1 504 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 WASHC2DQ5SRD0 308 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 LRRC74BQ6ZQY2 392 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 CLNKQ7Z7G1 428 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 TTC7BQ86TV6 843 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 B4GALNT2Q8NHY0 566 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 WDR60Q8WVS4 1066 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 NRG4Q8WWG1 115 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 KIFC3Q9BVG8 833 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 hCG_2014768A0A024R1R8 64 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 SLC16A4O15374 487 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 ACADSP16219 412 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 MFAP3P55082 362 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 ZYXQ15942 572 aaKnown RBP15.53■□□□□ 0.08
COL6A2-201ENST00000300527 PLEKHG4Q58EX7 1191 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 CFAP157Q5JU67 520 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 MAK16Q9BXY0 300 aaKnown RBP15.53■□□□□ 0.08
COL6A2-201ENST00000300527 HSPBP1Q9NZL4 362 aa15.53■□□□□ 0.08
COL6A2-201ENST00000300527 TBX10O75333 385 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 CNGA1P29973 690 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 CCNG1P51959 295 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 CCDC15Q0P6D6 951 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 AP3B2Q13367 1082 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 MOGSQ13724 837 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 PLEKHO2Q8TD55 490 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 LXNQ9BS40 222 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 GPRC5CQ9NQ84 441 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 NOCTQ9UK39 431 aaKnown RBP15.52■□□□□ 0.08
COL6A2-201ENST00000300527 IRF6O14896 467 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 TRAF1Q13077 416 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 GALNT15Q8N3T1 639 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 WDR18Q9BV38 432 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 OSBPL8Q9BZF1 889 aa15.52■□□□□ 0.08
COL6A2-201ENST00000300527 SMAPO00193 183 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 NPTXRO95502 500 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 NEK3P51956 506 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 ARFIP2P53365 341 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 PDK4Q16654 411 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 XXYLT1Q8NBI6 393 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 GLT8D2Q9H1C3 349 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 USP20Q9Y2K6 914 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 LRCH1Q9Y2L9 728 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 ITGB4P16144 1822 aa15.52■□□□□ 0.07
COL6A2-201ENST00000300527 CYP3A7-CYP3A51PA0A087WV96 503 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 KITP10721 976 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 CYP3A7P24462 503 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 SSTR1P30872 391 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 MTMR2Q13614 643 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 CUL3Q13618 768 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 IRGCQ6NXR0 463 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 PADI6Q6TGC4 694 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 TAS1R2Q8TE23 839 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 WDR35Q9P2L0 1181 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 SLC17A7Q9P2U7 560 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.51■□□□□ 0.07
COL6A2-201ENST00000300527 LAMB1P07942 1786 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 GOLGB1Q14789 3259 aaKnown RBP15.51■□□□□ 0.07
COL6A2-201ENST00000300527 F5H6K3 240 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 SGK1O00141 431 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 CCDC22O60826 627 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 USP1O94782 785 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 RTN3O95197 1032 aaPredicted RBP15.51■□□□□ 0.07
COL6A2-201ENST00000300527 ENO1P06733 434 aaKnown RBP15.51■□□□□ 0.07
COL6A2-201ENST00000300527 PGM1P36871 562 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 PEX3P56589 373 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 TAS2R40P59535 323 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 KDSRQ06136 332 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 PPP2R5CQ13362 524 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 AMIGO3Q86WK7 504 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 CLPTM1LQ96KA5 538 aa15.51■□□□□ 0.07
COL6A2-201ENST00000300527 ZNF577Q9BSK1 485 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms