RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SH3KBP1Q96B97 665 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 WNK4Q96J92 1243 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 AGAP3Q96P47 875 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 CLPTM1O96005 669 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 MTM1Q13496 603 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SLC29A2Q14542 456 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 NDUFA5Q16718 116 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 PFKFB3Q16875 520 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 DCAF4L1Q3SXM0 396 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 METTL16Q86W50 562 aaKnown RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 MPP6Q9NZW5 540 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 DISP1Q96F81 1524 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 EMSYQ7Z589 1322 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 DFFAO00273 331 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 SMNDC1O75940 238 aaKnown RBP eCLIP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 AKR1B1P15121 316 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 FXR1P51114 621 aaKnown RBP eCLIP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 GPC3P51654 580 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 HSPA2P54652 639 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 KRR1Q13601 381 aaKnown RBP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 KCTD21Q4G0X4 260 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 CYB5R4Q7L1T6 521 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 TBC1D10CQ8IV04 446 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 GUF1Q8N442 669 aaKnown RBP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 ELMO2Q96JJ3 720 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 AGPAT5Q9NUQ2 364 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 STAP1Q9ULZ2 295 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 STK36Q9NRP7 1315 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 ARHGEF37A1IGU5 675 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 MAGEA4P43358 317 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 AASDHQ4L235 1098 aaPredicted RBP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 ISCUQ9H1K1 167 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 SEC31BQ9NQW1 1179 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 PCDHA6Q9UN73 950 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 PCDHA8Q9Y5H6 950 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 POTEFA5A3E0 1075 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 KRT16P08779 473 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 POTEIP0CG38 1075 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 PHKG2P15735 406 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 SLC1A1P43005 524 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 FMR1Q06787 632 aaKnown RBP eCLIP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 POTEGQ6S5H5 508 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 POTEEQ6S8J3 1075 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 CALML6Q8TD86 181 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 DIS3LQ8TF46 1054 aaKnown RBP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 RPAP3Q9H6T3 665 aaPredicted RBP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 MBD2Q9UBB5 411 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 DENND3A2RUS2 1198 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 ZNF839A8K0R7 811 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 TLR2O60603 784 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 ATP9AO75110 1047 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 PRELPP51888 382 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 ADRM1Q16186 407 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 TRIM71Q2Q1W2 868 aaKnown RBP15.56■□□□□ 0.08
SCN3B-201ENST00000299333 C3orf62Q6ZUJ4 267 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 CYFIP1Q7L576 1253 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 CPVLQ9H3G5 476 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 RAB6BQ9NRW1 208 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 DAPK2Q9UIK4 370 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 BCS1LQ9Y276 419 aa15.56■□□□□ 0.08
SCN3B-201ENST00000299333 KIF28PB7ZC32 967 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 HSD17B3P37058 310 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 PWP1Q13610 501 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 NKX1-1Q15270 411 aaPredicted RBP15.55■□□□□ 0.08
SCN3B-201ENST00000299333 C11orf74Q86VG3 221 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 ARID3BQ8IVW6 561 aaPredicted RBP15.55■□□□□ 0.08
SCN3B-201ENST00000299333 OR8H2Q8N162 312 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 SLC30A5Q8TAD4 765 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 OSBPL10Q9BXB5 764 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 PHTF1Q9UMS5 762 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 AP3B1O00203 1094 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 SEMA3DO95025 777 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 KRT6AP02538 564 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 KRT6BP04259 564 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 KRT6CP48668 564 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 GALCP54803 685 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 MEI1Q5TIA1 1274 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 BBS7Q8IWZ6 715 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 KLHL20Q9Y2M5 609 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 MYO3BQ8WXR4 1341 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 ZNF197O14709 1029 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 MOCS2O96007 188 aaPredicted RBP15.55■□□□□ 0.08
SCN3B-201ENST00000299333 SOX6P35712 828 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 SERPINB9P50453 376 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 RCOR2Q8IZ40 523 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 PNKPQ96T60 521 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 SIK2Q9H0K1 926 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 RERGLQ9H628 205 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 HEY2Q9UBP5 337 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 ADORA2BP29275 332 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 ITIH4Q14624 930 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 CENPPQ6IPU0 288 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 IZUMO2Q6UXV1 221 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 KCNB2Q92953 911 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 TMEM260Q9NX78 707 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 AATKQ6ZMQ8 1374 aa15.55■□□□□ 0.08
SCN3B-201ENST00000299333 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms