RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ANO9A1A5B4 782 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 CTIFO43310 598 aaKnown RBP24.49■■□□□ 1.51
PTX3-201ENST00000295927 CABYRO75952 493 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 GRK4P32298 578 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 PTGISQ16647 500 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 UBXN11Q5T124 520 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 RPAINQ86UA6 219 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 NT5DC4Q86YG4 428 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 TAF4BQ92750 862 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 SNX27Q96L92 541 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 ISCUQ9H1K1 167 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 CXCL16Q9H2A7 254 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 HMX1Q9NP08 348 aaPredicted RBP24.49■■□□□ 1.51
PTX3-201ENST00000295927 JRKLQ9Y4A0 524 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 FAM170AA1A519 330 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 CTSHP09668 335 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 TMEM253P0C7T8 217 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 GUCY2FP51841 1108 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 YARSP54577 528 aaKnown RBP24.48■■□□□ 1.51
PTX3-201ENST00000295927 ITGA7Q13683 1181 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 TUBB2AQ13885 445 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 PAPD7Q5XG87 772 aaKnown RBP24.48■■□□□ 1.51
PTX3-201ENST00000295927 LHX8Q68G74 356 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 RBBP8NLQ8NC74 664 aaPredicted RBP24.48■■□□□ 1.51
PTX3-201ENST00000295927 KIF12Q96FN5 646 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 TUBB2BQ9BVA1 445 aa24.48■■□□□ 1.51
PTX3-201ENST00000295927 A0A0A6YYK5 440 aaPredicted RBP24.47■■□□□ 1.51
PTX3-201ENST00000295927 ANKRD62A6NC57 917 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 RTN2O75298 545 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 CHRNA1P02708 482 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 FTLP02792 175 aaPredicted RBP24.47■■□□□ 1.51
PTX3-201ENST00000295927 GZMAP12544 262 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 ABCB4P21439 1286 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 LRRN4CLQ8ND94 238 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 CTNNBL1Q8WYA6 563 aaPredicted RBP24.47■■□□□ 1.51
PTX3-201ENST00000295927 CARD6Q9BX69 1037 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 SENP6Q9GZR1 1112 aaPredicted RBP24.47■■□□□ 1.51
PTX3-201ENST00000295927 DPP3Q9NY33 737 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 TSKSQ9UJT2 592 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 PCDHGC5Q9Y5F6 944 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 PTCH2Q9Y6C5 1203 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 PDCD11Q14690 1871 aaKnown RBP24.47■■□□□ 1.51
PTX3-201ENST00000295927 DNAH12Q6ZR08 3092 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 PALMO75781 387 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 RPLP2P05387 115 aaKnown RBP24.47■■□□□ 1.51
PTX3-201ENST00000295927 ASPAP45381 313 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 MGAT3Q09327 533 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 ZNF677Q86XU0 584 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 NXF1Q9UBU9 619 aaKnown RBP24.47■■□□□ 1.51
PTX3-201ENST00000295927 ITGA11Q9UKX5 1188 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 POLIQ9UNA4 740 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 DERAQ9Y315 318 aa24.47■■□□□ 1.51
PTX3-201ENST00000295927 RECQL4O94761 1208 aa24.46■■□□□ 1.51
PTX3-201ENST00000295927 POLR2BP30876 1174 aaKnown RBP24.46■■□□□ 1.51
PTX3-201ENST00000295927 NOP2P46087 812 aaKnown RBP24.46■■□□□ 1.51
PTX3-201ENST00000295927 ZNF667Q5HYK9 610 aa24.46■■□□□ 1.51
PTX3-201ENST00000295927 SCARA5Q6ZMJ2 495 aa24.46■■□□□ 1.51
PTX3-201ENST00000295927 ZMAT2Q96NC0 199 aaKnown RBP24.46■■□□□ 1.51
PTX3-201ENST00000295927 APOL6Q9BWW8 343 aa24.46■■□□□ 1.51
PTX3-201ENST00000295927 THAP2Q9H0W7 228 aa24.46■■□□□ 1.51
PTX3-201ENST00000295927 CISHQ9NSE2 258 aa24.46■■□□□ 1.51
PTX3-201ENST00000295927 TRIM17Q9Y577 477 aa24.46■■□□□ 1.51
PTX3-201ENST00000295927 NCANO14594 1321 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 MOXD2PA6NHM9 499 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 RPS6KA5O75582 802 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 WEE2P0C1S8 567 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 CD58P19256 250 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 AKAP5P24588 427 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 ATICP31939 592 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 THPOP40225 353 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 ZNF132P52740 706 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 ALKAL1Q6UXT8 129 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 TSC1Q92574 1164 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 AGAP1Q9UPQ3 857 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 SAR1BQ9Y6B6 198 aa24.45■■□□□ 1.51
PTX3-201ENST00000295927 GRID2IPA4D2P6 1211 aa24.45■■□□□ 1.5
PTX3-201ENST00000295927 GNA15P30679 374 aa24.45■■□□□ 1.5
PTX3-201ENST00000295927 IFI16Q16666 785 aaKnown RBP24.45■■□□□ 1.5
PTX3-201ENST00000295927 WDR72Q3MJ13 1102 aa24.45■■□□□ 1.5
PTX3-201ENST00000295927 ARHGEF26Q96DR7 871 aa24.45■■□□□ 1.5
PTX3-201ENST00000295927 TSEN34Q9BSV6 310 aaKnown RBP24.45■■□□□ 1.5
PTX3-201ENST00000295927 ST3GAL5Q9UNP4 418 aa24.45■■□□□ 1.5
PTX3-201ENST00000295927 PTPN11Q06124 597 aaPredicted RBP24.44■■□□□ 1.5
PTX3-201ENST00000295927 ZBTB6Q15916 424 aa24.44■■□□□ 1.5
PTX3-201ENST00000295927 TWF2Q6IBS0 349 aaKnown RBP24.44■■□□□ 1.5
PTX3-201ENST00000295927 MNS1Q8NEH6 495 aa24.44■■□□□ 1.5
PTX3-201ENST00000295927 RFFLQ8WZ73 363 aa24.44■■□□□ 1.5
PTX3-201ENST00000295927 GLT1D1Q96MS3 346 aa24.44■■□□□ 1.5
PTX3-201ENST00000295927 VRTNQ9H8Y1 702 aa24.44■■□□□ 1.5
PTX3-201ENST00000295927 TRMT13Q9NUP7 481 aaKnown RBP24.44■■□□□ 1.5
PTX3-201ENST00000295927 CNTN3Q9P232 1028 aa24.44■■□□□ 1.5
PTX3-201ENST00000295927 IPPQ9Y573 584 aa24.44■■□□□ 1.5
PTX3-201ENST00000295927 TFRCP02786 760 aaKnown RBP24.43■■□□□ 1.5
PTX3-201ENST00000295927 RBP5P82980 135 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 PTK7Q13308 1070 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 CLEC16AQ2KHT3 1053 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 SMG8Q8ND04 991 aaKnown RBP24.43■■□□□ 1.5
PTX3-201ENST00000295927 TPCN2Q8NHX9 752 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 SLC35G2Q8TBE7 412 aa24.43■■□□□ 1.5
PTX3-201ENST00000295927 HPDLQ96IR7 371 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms