RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 PRKCBP05771 671 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 SRGAP2CP0DJJ0 459 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 CTNNA2P26232 953 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 MARK3P27448 753 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 GTF2A2P52657 109 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 COPS2P61201 443 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 POU5F1Q01860 360 aaKnown RBP9.9□□□□□ -0.83
CLRN1-201ENST00000295911 MCL1Q07820 350 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 MESDQ14696 234 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.83
CLRN1-201ENST00000295911 TSHZ1Q6ZSZ6 1077 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 FBXO16Q8IX29 292 aaPredicted RBP9.9□□□□□ -0.83
CLRN1-201ENST00000295911 RNF149Q8NC42 400 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 ZNF564Q8TBZ8 553 aaPredicted RBP9.9□□□□□ -0.83
CLRN1-201ENST00000295911 IFT81Q8WYA0 676 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 RUNDC3BQ96NL0 473 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 RUFY1Q96T51 708 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 ZSWIM1Q9BR11 485 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 NUP85Q9BW27 656 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 AP1M1Q9BXS5 423 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 NFKBIZQ9BYH8 718 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 RAB17Q9H0T7 212 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.9□□□□□ -0.83
CLRN1-201ENST00000295911 FAM114A2Q9NRY5 505 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.83
CLRN1-201ENST00000295911 VPS18Q9P253 973 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 ADAM21Q9UKJ8 722 aa9.9□□□□□ -0.83
CLRN1-201ENST00000295911 UTP11Q9Y3A2 253 aaKnown RBP9.9□□□□□ -0.83
CLRN1-201ENST00000295911 COL1A2P08123 1366 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 RBM47A0AV96 593 aaKnown RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 GOLGA8KD6RF30 607 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 ACKR2O00590 384 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 SYF2O95926 243 aaKnown RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 GH1P01241 217 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 CLTAP09496 248 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 UNGP13051 313 aaPredicted RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 COMTP21964 271 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 GJA5P36382 358 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 SLC1A1P43005 524 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 CARSP49589 748 aaKnown RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 PTENP60484 403 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 FKBP1BP68106 108 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 NCOA4Q13772 614 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 DHX34Q14147 1143 aaKnown RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 DUOXA2Q1HG44 320 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 SGSM1Q2NKQ1 1148 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 ZNF792Q3KQV3 632 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 SEL1L2Q5TEA6 688 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 LIN9Q5TKA1 542 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 EFCAB12Q6NXP0 572 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 MPZL3Q6UWV2 235 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 ARMCX2Q7L311 632 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 EFCAB13Q8IY85 973 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 GSPT2Q8IYD1 628 aaKnown RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 CASKIN2Q8WXE0 1202 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 EMID1Q96A84 441 aaPredicted RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 FAXDC2Q96IV6 333 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 FZD8Q9H461 694 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 CNOT8Q9UFF9 292 aaKnown RBP9.89□□□□□ -0.83
CLRN1-201ENST00000295911 LCMT1Q9UIC8 334 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 MTUS1Q9ULD2 1270 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 NFU1Q9UMS0 254 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 PCDHB4Q9Y5E5 795 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 PCDHA3Q9Y5H8 950 aa9.89□□□□□ -0.83
CLRN1-201ENST00000295911 CITO14578 2027 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PDHXO00330 501 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 SPOPO43791 374 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 FAM189A1O60320 539 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 ERLIN2O94905 339 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 IL18RAPO95256 599 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 CYP1A1P04798 512 aaPredicted RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 ACO1P21399 889 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PROZP22891 400 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 MAPK4P31152 587 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 GBP1P32455 592 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 CYP2C19P33261 490 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 CTNNA1P35221 906 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 GGCXP38435 758 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 NSFP46459 744 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PEX5P50542 639 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 YWHAEP62258 255 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 NOP14P78316 857 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 MRPS25P82663 173 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 CENPCQ03188 943 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PPFIA1Q13136 1202 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 DRP2Q13474 957 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 KYAT1Q16773 422 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PTPROQ16827 1216 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 FAM187BQ17R55 369 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 ATF7IP2Q5U623 682 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 DCAF12L1Q5VU92 463 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 LMBRD2Q68DH5 695 aaPredicted RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 ANKRD23Q86SG2 305 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 RHPN2Q8IUC4 686 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 MCOLN2Q8IZK6 566 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PPTC7Q8NI37 304 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 MAIP1Q8WWC4 291 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 SEC14L1Q92503 715 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms