RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SLC40A1Q9NP59 571 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 EXOSC4Q9NPD3 245 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 AGO2Q9UKV8 859 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 NEU2Q9Y3R4 380 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 USP15Q9Y4E8 981 aaPredicted RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 UTYO14607 1347 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 ECE2O60344 883 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 KLC1Q07866 573 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 TMEM62Q0P6H9 643 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 OVGP1Q12889 678 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 MFN1Q8IWA4 741 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 CCT7Q99832 543 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 RAB14P61106 215 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 MFSD4BQ5TF39 518 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 APOL5Q9BWW9 433 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 SNX12Q9UMY4 172 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 CHI3L2Q15782 390 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 STX19Q8N4C7 294 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 BARHL2Q9NY43 387 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 STK36Q9NRP7 1315 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 ARHGEF37A1IGU5 675 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 MMP10P09238 476 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 AKR1B1P15121 316 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 CCZ1BP86790 482 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 CCZ1P86791 482 aaPredicted RBP16.91■□□□□ 0.3
SSRP1-202ENST00000293880 TRIP10Q15642 601 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 CYP4A22Q5TCH4 519 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 C16orf89Q6UX73 402 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 PIGBQ92521 554 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 RBM15Q96T37 977 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■■□□□ 13.6
SSRP1-202ENST00000293880 GEMIN8Q9NWZ8 242 aaKnown RBP16.91■□□□□ 0.3
SSRP1-202ENST00000293880 ZNF263O14978 683 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
SSRP1-202ENST00000293880 ZIM3Q96PE6 472 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 WRNIP1Q96S55 665 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 ARHGEF38Q9NXL2 777 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 PPP1R37O75864 691 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 SLC9A1P19634 815 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 FAM49BQ9NUQ9 324 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 STAP1Q9ULZ2 295 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
SSRP1-202ENST00000293880 PDGFRBP09619 1106 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 LAMB3Q13751 1172 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 BNIPLQ7Z465 357 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 TMEM143Q96AN5 459 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.91■□□□□ 0.3
SSRP1-202ENST00000293880 STAT4Q14765 748 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 TRIM16LQ309B1 348 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 SIKE1Q9BRV8 207 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 RAB6BQ9NRW1 208 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 BFARQ9NZS9 450 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 ZC3H7BQ9UGR2 993 aaKnown RBP16.91■□□□□ 0.3
SSRP1-202ENST00000293880 PCDHGB4Q9UN71 923 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 ZDHHC9Q9Y397 364 aa16.91■□□□□ 0.3
SSRP1-202ENST00000293880 AKIRIN2Q53H80 203 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 CATSPER1Q8NEC5 780 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 DNAJC9Q8WXX5 260 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 EFCAB14O75071 495 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 GGPS1O95749 300 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 QARSP47897 775 aaKnown RBP16.9■□□□□ 0.3
SSRP1-202ENST00000293880 UTS2BQ765I0 119 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 CASP10Q92851 521 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 ZFYVE1Q9HBF4 777 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 TOPORSQ9NS56 1045 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-202ENST00000293880 LOC100653049A0A140TA62 436 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 KRT34O76011 436 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 AGTP01019 485 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 DIS3LQ8TF46 1054 aaKnown RBP16.9■□□□□ 0.3
SSRP1-202ENST00000293880 PTPRN2Q92932 1015 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 AGBL1Q96MI9 1066 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 AP3B1O00203 1094 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 EPC2Q52LR7 807 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 TRPM8Q7Z2W7 1104 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 GRAMD1AQ96CP6 724 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 XPO6Q96QU8 1125 aaKnown RBP16.9■□□□□ 0.3
SSRP1-202ENST00000293880 CTCFP49711 727 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-202ENST00000293880 E4F1Q66K89 784 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-202ENST00000293880 PHF21AQ96BD5 680 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 WNK4Q96J92 1243 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 KIAA1586Q9HCI6 787 aa16.9■□□□□ 0.3
SSRP1-202ENST00000293880 PSMC3IPQ9P2W1 217 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-202ENST00000293880 CPDO75976 1380 aa16.89■□□□□ 0.3
SSRP1-202ENST00000293880 B2RBV5 119 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 P4HBP07237 508 aaKnown RBP16.89■□□□□ 0.29
SSRP1-202ENST00000293880 ZNF200P98182 395 aaPredicted RBP16.89■□□□□ 0.29
SSRP1-202ENST00000293880 CIAPIN1Q6FI81 312 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 ATL2Q8NHH9 583 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 TMEM120BA0PK00 339 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 KDM6BO15054 1643 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 SERPINB5P36952 375 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 ITGA8P53708 1063 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 MTERF3Q96E29 417 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 DCUN1D1Q96GG9 259 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 RNF146Q9NTX7 359 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 GID8Q9NWU2 228 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 ZCCHC11Q5TAX3 1644 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms