RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 DCAF6Q58WW2 860 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 AGBL3Q8NEM8 1001 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 RRN3P2A6NIE6 340 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 SLC25A41Q8N5S1 370 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 KIFC3Q9BVG8 833 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 PRMT7Q9NVM4 692 aaPredicted RBP18.18■□□□□ 0.5
SHANK1-201ENST00000293441 SENP1Q9P0U3 644 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 CNTNAP5Q8WYK1 1306 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ARHGAP10A1A4S6 786 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 EXTL3O43909 919 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 HAUS5O94927 633 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ARFIP2P53365 341 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ARHGEF7Q14155 803 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 P3H1Q32P28 736 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ANKS3Q6ZW76 656 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 TRIML2Q8N7C3 387 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ATL2Q8NHH9 583 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ARL8AQ96BM9 186 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 CYP4F11Q9HBI6 524 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 FBXL5Q9UKA1 691 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 PCDHGB4Q9UN71 923 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 SETSIPP0DME0 302 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 UNC45AQ9H3U1 944 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 ZNF185O15231 689 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 HMOX2P30519 316 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 FMR1Q06787 632 aaKnown RBP eCLIP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 TWF1Q12792 350 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 PIGHQ14442 188 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 DPF2Q92785 391 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 ADAM33Q9BZ11 813 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 EHD2Q9NZN4 543 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 MAD2L2Q9UI95 211 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 IGSF9BQ9UPX0 1349 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 SYCE1LA8MT33 242 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 PSMD3O43242 534 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 PCSK1P29120 753 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 ETFBP38117 255 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 NR1H4Q96RI1 486 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 KDM4CQ9H3R0 1056 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 RAB6BQ9NRW1 208 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 UCHL3P15374 230 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 ARL4DP49703 201 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 SPDYAQ5MJ70 313 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 ING2Q9H160 280 aa18.17■□□□□ 0.5
SHANK1-201ENST00000293441 CDR2LQ86X02 465 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 MRPL40Q9NQ50 206 aaKnown RBP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 ABI2Q9NYB9 513 aaPredicted RBP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 XPO7Q9UIA9 1087 aaKnown RBP18.17■□□□□ 0.5
SHANK1-201ENST00000293441 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 PYGLP06737 847 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 AMHR2Q16671 573 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 C10orf120Q5SQS8 335 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 GLT1D1Q96MS3 346 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 FOPNLQ96NB1 174 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 CHP1Q99653 195 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 NDUFS3O75489 264 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 ZNF189O75820 626 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-201ENST00000293441 GALCP54803 685 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 ADSSL1Q8N142 457 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 HPDLQ96IR7 371 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 NAGPAQ9UK23 515 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 MAFGO15525 162 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 GTF2H1P32780 548 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 CYP2C19P33261 490 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 ATP6V1E1P36543 226 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 NPEPPSP55786 919 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 L3MBTL3Q96JM7 780 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-201ENST00000293441 PRG3Q9Y2Y8 225 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-201ENST00000293441 FHOD1Q9Y613 1164 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 HIST1H2AGP0C0S8 130 aaPredicted RBP18.16■□□□□ 0.5
SHANK1-201ENST00000293441 HIST1H2ADP20671 130 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 RFWD2Q8NHY2 731 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 HIST1H2AHQ96KK5 128 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 LRRC37BQ96QE4 947 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 HIST1H2AJQ99878 128 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 H2AFJQ9BTM1 129 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 RHOBTB3O94955 611 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 LRG1P02750 347 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 ITGB3P05106 788 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 MCF2P10911 925 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 HARS2P49590 506 aaKnown RBP18.16■□□□□ 0.5
SHANK1-201ENST00000293441 RIT2Q99578 217 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 METTL5Q9NRN9 209 aaKnown RBP18.16■□□□□ 0.5
SHANK1-201ENST00000293441 FBXO28Q9NVF7 368 aa18.16■□□□□ 0.5
SHANK1-201ENST00000293441 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 KIZQ2M2Z5 673 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 EPC1Q9H2F5 836 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 TMEM8AQ9HCN3 771 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 ARHGEF38Q9NXL2 777 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 SLC30A1Q9Y6M5 507 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 ZSCAN9O15535 394 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-201ENST00000293441 SLC26A4O43511 780 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 OCM2P0CE71 109 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 OCMP0CE72 109 aaPredicted RBP18.15■□□□□ 0.5
SHANK1-201ENST00000293441 RGS2P41220 211 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 STK4Q13043 487 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 SLC18A3Q16572 532 aa18.15■□□□□ 0.5
SHANK1-201ENST00000293441 SDE2Q6IQ49 451 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms