RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 RTP3Q9BQQ7 232 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 TBC1D17Q9HA65 648 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 PLEKHA5Q9HAU0 1116 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 KCNH3Q9ULD8 1083 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 H7C4K7 107 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 NRG2O14511 850 aaPredicted RBP27.49■■□□□ 1.99
U2AF1-201ENST00000291552 ARPP19P56211 112 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 RESTQ13127 1097 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 SPECC1Q5M775 1068 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 LARP4BQ92615 738 aaKnown RBP27.49■■□□□ 1.99
U2AF1-201ENST00000291552 KIF12Q96FN5 646 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 EPSTI1Q96J88 318 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 CCSER1Q9C0I3 900 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 ARHGEF3Q9NR81 526 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 PCDHB8Q9UN66 801 aa27.49■■□□□ 1.99
U2AF1-201ENST00000291552 PTPRZ1P23471 2315 aaPredicted RBP27.49■■□□□ 1.99
U2AF1-201ENST00000291552 CACNA1IQ9P0X4 2223 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 LACTBL1A8MY62 500 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 PROB1E7EW31 1015 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 TRAK2O60296 914 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 ADRB2P07550 413 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 RHOP08100 348 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 ATF2P15336 505 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 NMT1P30419 496 aaKnown RBP27.48■■□□□ 1.99
U2AF1-201ENST00000291552 CTXN3Q4LDR2 81 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 FAM173BQ6P4H8 233 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 TCEAL8Q8IYN2 117 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 DTWD2Q8NBA8 298 aa27.48■■□□□ 1.99
U2AF1-201ENST00000291552 FBXO2Q9UK22 296 aaPredicted RBP27.48■■□□□ 1.99
U2AF1-201ENST00000291552 A0A0B4J269 797 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 M0QZQ0 153 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 PPEF2O14830 753 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 OGTO15294 1046 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 MARCKSP29966 332 aaPredicted RBP27.47■■□□□ 1.99
U2AF1-201ENST00000291552 NBL1P41271 181 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 AARSP49588 968 aaKnown RBP eCLIP27.47■■□□□ 1.99
U2AF1-201ENST00000291552 GPC5P78333 572 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 ZNF280DQ6N043 979 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 MAP4K3Q8IVH8 894 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 RASSF8Q8NHQ8 419 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 KXD1Q9BQD3 176 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 AVENQ9NQS1 362 aaPredicted RBP27.47■■□□□ 1.99
U2AF1-201ENST00000291552 UBQLN1Q9UMX0 589 aaKnown RBP27.47■■□□□ 1.99
U2AF1-201ENST00000291552 INSL5Q9Y5Q6 135 aa27.47■■□□□ 1.99
U2AF1-201ENST00000291552 TCHHQ07283 1943 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 TISP43B9A030 160 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 GFRA3O60609 400 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 TBCAO75347 108 aaKnown RBP27.46■■□□□ 1.99
U2AF1-201ENST00000291552 KRT18P05783 430 aaKnown RBP27.46■■□□□ 1.99
U2AF1-201ENST00000291552 CEBPBP17676 345 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 GTF2BQ00403 316 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 PPP2R3AQ06190 1150 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 MTSS1LQ765P7 747 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 ZHX3Q9H4I2 956 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 CYP4F11Q9HBI6 524 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 MRPS23Q9Y3D9 190 aaKnown RBP27.46■■□□□ 1.99
U2AF1-201ENST00000291552 WDR87Q6ZQQ6 2873 aa27.46■■□□□ 1.99
U2AF1-201ENST00000291552 FANCMQ8IYD8 2048 aa27.45■■□□□ 1.99
U2AF1-201ENST00000291552 ANKRD63C9JTQ0 380 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 PRRG1O14668 218 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 VNN2O95498 520 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 CYP3A5P20815 502 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 PDCP20941 246 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 SYT1P21579 422 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 SCP2P22307 547 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 ZC2HC1CQ53FD0 456 aaPredicted RBP27.45■■□□□ 1.98
U2AF1-201ENST00000291552 PRSS36Q5K4E3 855 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 TPGS2Q68CL5 300 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 PHLDB3Q6NSJ2 640 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 APPL2Q8NEU8 664 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 TCEAL4Q96EI5 215 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 CLIC6Q96NY7 704 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 MSTO1Q9BUK6 570 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 IKZF4Q9H2S9 585 aa27.45■■□□□ 1.98
U2AF1-201ENST00000291552 CPSF3Q9UKF6 684 aaKnown RBP27.45■■□□□ 1.98
U2AF1-201ENST00000291552 TIMM13Q9Y5L4 95 aaPredicted RBP27.45■■□□□ 1.98
U2AF1-201ENST00000291552 COL4A2P08572 1712 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 PATJQ8NI35 1801 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 GVINP1Q7Z2Y8 2422 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 LRG1P02750 347 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 ELF1P32519 619 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 DDIT3P35638 169 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 CCR2P41597 374 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 KYAT1Q16773 422 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 ASCL5Q7RTU5 278 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 RPF1Q9H9Y2 349 aaKnown RBP27.44■■□□□ 1.98
U2AF1-201ENST00000291552 DLGAP2Q9P1A6 1054 aa27.44■■□□□ 1.98
U2AF1-201ENST00000291552 AFF4Q9UHB7 1163 aaKnown RBP27.44■■□□□ 1.98
U2AF1-201ENST00000291552 STK25O00506 426 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 PTPN2P17706 415 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 ADCY1Q08828 1119 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 ANGPT1Q15389 498 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 RNF19BQ6ZMZ0 732 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 FRMD5Q7Z6J6 570 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 BEST2Q8NFU1 509 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 MCRS1Q96EZ8 462 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 CORO1BQ9BR76 489 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 FOXQ1Q9C009 403 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 ST6GALNAC4Q9H4F1 302 aa27.43■■□□□ 1.98
U2AF1-201ENST00000291552 SRPRBQ9Y5M8 271 aaKnown RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms