RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PLXNA3P51805 1871 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 CLIC2O15247 247 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 SPATA31D3P0C874 917 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 FAM160A1Q05DH4 1040 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 KNOP1Q1ED39 458 aaKnown RBP27.24■■□□□ 1.95
PDF-201ENST00000288022 CES5AQ6NT32 575 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 ELMSAN1Q6PJG2 1045 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 SPATA31D4Q6ZUB0 917 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 KIAA0895Q8NCT3 520 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 SUSD3Q96L08 255 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 MAN1C1Q9NR34 630 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 DPP7Q9UHL4 492 aa27.24■■□□□ 1.95
PDF-201ENST00000288022 CYP2J2P51589 502 aa27.23■■□□□ 1.95
PDF-201ENST00000288022 SNRPFP62306 86 aaKnown RBP27.23■■□□□ 1.95
PDF-201ENST00000288022 TFAMQ00059 246 aaKnown RBP27.23■■□□□ 1.95
PDF-201ENST00000288022 ITIH3Q06033 890 aa27.23■■□□□ 1.95
PDF-201ENST00000288022 ANKS3Q6ZW76 656 aa27.23■■□□□ 1.95
PDF-201ENST00000288022 EFCAB13Q8IY85 973 aa27.23■■□□□ 1.95
PDF-201ENST00000288022 CLSTN3Q9BQT9 956 aa27.23■■□□□ 1.95
PDF-201ENST00000288022 SFXN1Q9H9B4 322 aa27.23■■□□□ 1.95
PDF-201ENST00000288022 DPP3Q9NY33 737 aa27.23■■□□□ 1.95
PDF-201ENST00000288022 SPTBN5Q9NRC6 3674 aaKnown RBP27.22■■□□□ 1.95
PDF-201ENST00000288022 ZNF233A6NK53 670 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 PPEF2O14830 753 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 SYN3O14994 580 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 TGM5O43548 720 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 WNT7BP56706 349 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 SNW1Q13573 536 aaKnown RBP27.22■■□□□ 1.95
PDF-201ENST00000288022 VARS2Q5ST30 1063 aaKnown RBP27.22■■□□□ 1.95
PDF-201ENST00000288022 C9orf57Q5W0N0 161 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 DSTYKQ6XUX3 929 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 NT5DC4Q86YG4 428 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 CBWD2Q8IUF1 395 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 ENGASEQ8NFI3 743 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 ADAM7Q9H2U9 754 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 KIAA1586Q9HCI6 787 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 PDE11AQ9HCR9 933 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 CGNQ9P2M7 1197 aaKnown RBP27.22■■□□□ 1.95
PDF-201ENST00000288022 MTRRQ9UBK8 725 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 PRKAG3Q9UGI9 489 aa27.22■■□□□ 1.95
PDF-201ENST00000288022 RHOBTB3O94955 611 aa27.21■■□□□ 1.95
PDF-201ENST00000288022 SSTR3P32745 418 aaPredicted RBP27.21■■□□□ 1.95
PDF-201ENST00000288022 OR1D2P34982 312 aa27.21■■□□□ 1.95
PDF-201ENST00000288022 CBX2Q14781 532 aaPredicted RBP27.21■■□□□ 1.95
PDF-201ENST00000288022 TMC5Q6UXY8 1006 aa27.21■■□□□ 1.95
PDF-201ENST00000288022 RDH13Q8NBN7 331 aa27.21■■□□□ 1.95
PDF-201ENST00000288022 APPL2Q8NEU8 664 aa27.21■■□□□ 1.95
PDF-201ENST00000288022 CACTINQ8WUQ7 758 aaKnown RBP27.21■■□□□ 1.95
PDF-201ENST00000288022 PCDHB8Q9UN66 801 aa27.21■■□□□ 1.95
PDF-201ENST00000288022 H7C4K7 107 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 ADAM12O43184 909 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 WEE2P0C1S8 567 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 PNOCQ13519 176 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 ADHFE1Q8IWW8 467 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 XXYLT1Q8NBI6 393 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 GOLGA5Q8TBA6 731 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 SUSD6Q92537 303 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 CDH22Q9UJ99 828 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 BACE2Q9Y5Z0 518 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 CDY1Q9Y6F8 540 aa27.2■■□□□ 1.94
PDF-201ENST00000288022 TNFRSF10AO00220 468 aa27.19■■□□□ 1.94
PDF-201ENST00000288022 KIF20AO95235 890 aa27.19■■□□□ 1.94
PDF-201ENST00000288022 ZP2Q05996 745 aa27.19■■□□□ 1.94
PDF-201ENST00000288022 KCNB1Q14721 858 aa27.19■■□□□ 1.94
PDF-201ENST00000288022 SNRNP35Q16560 246 aaKnown RBP27.19■■□□□ 1.94
PDF-201ENST00000288022 KREMEN2Q8NCW0 462 aa27.19■■□□□ 1.94
PDF-201ENST00000288022 RIPOR3Q96MK2 946 aa27.19■■□□□ 1.94
PDF-201ENST00000288022 POP1Q99575 1024 aaKnown RBP27.19■■□□□ 1.94
PDF-201ENST00000288022 PLEKHA4Q9H4M7 779 aa27.19■■□□□ 1.94
PDF-201ENST00000288022 HOOK1Q9UJC3 728 aaKnown RBP27.19■■□□□ 1.94
PDF-201ENST00000288022 ANO9A1A5B4 782 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 M0QZQ0 153 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 PIRO00625 290 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 GADD45BO75293 160 aaPredicted RBP27.18■■□□□ 1.94
PDF-201ENST00000288022 C1RP00736 705 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 TMEM191BP0C7N4 346 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 LILRA4P59901 499 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 SURF1Q15526 300 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 CTXN3Q4LDR2 81 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 LILRA6Q6PI73 481 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 GJD3Q8N144 294 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 HDAC7Q8WUI4 952 aa27.18■■□□□ 1.94
PDF-201ENST00000288022 TIMM13Q9Y5L4 95 aaPredicted RBP27.18■■□□□ 1.94
PDF-201ENST00000288022 EXOC3O60645 756 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 KINO60870 393 aaKnown RBP27.17■■□□□ 1.94
PDF-201ENST00000288022 MTHFRP42898 656 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 AARSP49588 968 aaKnown RBP eCLIP27.17■■□□□ 1.94
PDF-201ENST00000288022 ARPP19P56211 112 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 RAB33AQ14088 237 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 ATAT1Q5SQI0 421 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 LMBRD2Q68DH5 695 aaPredicted RBP27.17■■□□□ 1.94
PDF-201ENST00000288022 ZNF280DQ6N043 979 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 RSPO2Q6UXX9 243 aaPredicted RBP27.17■■□□□ 1.94
PDF-201ENST00000288022 USP37Q86T82 979 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 C12orf56Q8IXR9 622 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 TIGD1Q96MW7 591 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 NECTIN4Q96NY8 510 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 PHF7Q9BWX1 381 aaPredicted RBP27.17■■□□□ 1.94
PDF-201ENST00000288022 MAPK8IP1Q9UQF2 711 aa27.17■■□□□ 1.94
PDF-201ENST00000288022 SMC2O95347 1197 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms