RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CC2D2BQ6DHV5 1058 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 C4orf19Q8IY42 314 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 ZFAND2BQ8WV99 257 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 CBWD1Q9BRT8 395 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 FEM1BQ9UK73 627 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 UBIAD1Q9Y5Z9 338 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 CNGA1P29973 690 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 KRT17Q04695 432 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 TNIP1Q15025 636 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 PPP1R2P3Q6NXS1 205 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 MIER3Q7Z3K6 550 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 MAP4K3Q8IVH8 894 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 AGGF1Q8N302 714 aaeCLIP11.03□□□□□ -0.64
SKA1-201ENST00000285116 ZNF653Q96CK0 615 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 RMDN2Q96LZ7 410 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 ANKEF1Q9NU02 776 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 NFASCO94856 1347 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 TBC1D12O60347 775 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 RTN3O95197 1032 aaPredicted RBP11.02□□□□□ -0.64
SKA1-201ENST00000285116 ADRB2P07550 413 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 GNAT1P11488 350 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 UNGP13051 313 aaPredicted RBP11.02□□□□□ -0.64
SKA1-201ENST00000285116 SSR1P43307 286 aaKnown RBP11.02□□□□□ -0.64
SKA1-201ENST00000285116 QARSP47897 775 aaKnown RBP11.02□□□□□ -0.64
SKA1-201ENST00000285116 GCLCP48506 637 aaPredicted RBP11.02□□□□□ -0.64
SKA1-201ENST00000285116 SPDYAQ5MJ70 313 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 UBAP2Q5T6F2 1119 aaKnown RBP11.02□□□□□ -0.64
SKA1-201ENST00000285116 PCNX4Q63HM2 1172 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 USP37Q86T82 979 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 SLC47A2Q86VL8 602 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 STK32AQ8WU08 396 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 LRMDAQ9H2I8 198 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 C17orf75Q9HAS0 396 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 AGO4Q9HCK5 861 aaKnown RBP11.02□□□□□ -0.64
SKA1-201ENST00000285116 CYP39A1Q9NYL5 469 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 ZHX2Q9Y6X8 837 aa11.02□□□□□ -0.64
SKA1-201ENST00000285116 MAGEB2O15479 319 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 CYP26A1O43174 497 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 ECE2O60344 883 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 GAS8O95995 478 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 TAL1P17542 331 aaPredicted RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 ITGB5P18084 799 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 ABCD1P33897 745 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 RAD23BP54727 409 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 NR1H3Q13133 447 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 KLF1Q13351 362 aaPredicted RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 GNPTABQ3T906 1256 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 RGS9BPQ6ZS82 235 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 GALNT15Q8N3T1 639 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 RDM1Q8NG50 284 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 SPIRE2Q8WWL2 714 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 UTP4Q969X6 686 aaKnown RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 MAGEB18Q96M61 343 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 NTPCRQ9BSD7 190 aaKnown RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 DCLK3Q9C098 648 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 TBC1D22BQ9NU19 505 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 NKX1-2Q9UD57 310 aaPredicted RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 PSTPIP1O43586 416 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 PTGER2P43116 358 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 CLDN10P78369 228 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 STAT4Q14765 748 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 RASA2Q15283 850 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 SNRNP35Q16560 246 aaKnown RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 SLC5A9Q2M3M2 681 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 STYK1Q6J9G0 422 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 TDRPQ86YL5 185 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 ATL2Q8NHH9 583 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 TEKT4Q8WW24 435 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 SEMA4DQ92854 862 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 NT5C1BQ96P26 610 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 TMEM237Q96Q45 408 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 TGS1Q96RS0 853 aaKnown RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 FHDC1Q9C0D6 1143 aaPredicted RBP11.02□□□□□ -0.65
SKA1-201ENST00000285116 PPCSQ9HAB8 311 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 UBN1Q9NPG3 1134 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 ASB3Q9Y575 518 aa11.02□□□□□ -0.65
SKA1-201ENST00000285116 ASTN2O75129 1339 aaPredicted RBP11.01□□□□□ -0.65
SKA1-201ENST00000285116 PARP14Q460N5 1801 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 TMEM110-MUSTN1A8MSY1 372 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 PEX11AO75192 247 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 ICAM1P05362 532 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 TPBGLP0DKB5 382 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 ACADSP16219 412 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 MTFR1Q15390 333 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 CCNG2Q16589 344 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 LONRF1Q17RB8 773 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 CCDC142Q17RM4 750 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 TSNAXIP1Q2TAA8 658 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 ZNF746Q6NUN9 644 aaPredicted RBP11.01□□□□□ -0.65
SKA1-201ENST00000285116 PPP1R21Q6ZMI0 780 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 C15orf39Q6ZRI6 1047 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.01□□□□□ -0.65
SKA1-201ENST00000285116 ENDOVQ8N8Q3 282 aaKnown RBP11.01□□□□□ -0.65
SKA1-201ENST00000285116 ANKRD42Q8N9B4 389 aa11.01□□□□□ -0.65
SKA1-201ENST00000285116 FBXL13Q8NEE6 735 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms