RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 APBB1IPQ7Z5R6 666 aaPredicted RBP13.19□□□□□ -0.3
SPC25-201ENST00000282074 MCPH1Q8NEM0 835 aa13.19□□□□□ -0.3
SPC25-201ENST00000282074 ZSCAN18Q8TBC5 510 aaPredicted RBP13.19□□□□□ -0.3
SPC25-201ENST00000282074 ZSWIM3Q96MP5 696 aa13.19□□□□□ -0.3
SPC25-201ENST00000282074 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
SPC25-201ENST00000282074 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
SPC25-201ENST00000282074 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
SPC25-201ENST00000282074 SLITRK6Q9H5Y7 841 aa13.19□□□□□ -0.3
SPC25-201ENST00000282074 MAFFQ9ULX9 164 aa13.19□□□□□ -0.3
SPC25-201ENST00000282074 INSL5Q9Y5Q6 135 aa13.19□□□□□ -0.3
SPC25-201ENST00000282074 HEPACAM2A8MVW5 462 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 ACKR2O00590 384 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 CHADO15335 359 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 KCNK5O95279 499 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 PRKCBP05771 671 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 HSPA4P34932 840 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 CCR2P41597 374 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 BRCC3P46736 316 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 CD300LGQ6UXG3 332 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 RALGPS2Q86X27 583 aaPredicted RBP13.18□□□□□ -0.3
SPC25-201ENST00000282074 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 AIFM3Q96NN9 605 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 GPRC5CQ9NQ84 441 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
SPC25-201ENST00000282074 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
SPC25-201ENST00000282074 ARID2Q68CP9 1835 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 I3L4J1 428 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 ARNTLO00327 626 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
SPC25-201ENST00000282074 SYN3O14994 580 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 CDC45O75419 566 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 SEC24AO95486 1093 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 MYL4P12829 197 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 LIG1P18858 919 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 ACAP1Q15027 740 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 GAB3Q8WWW8 586 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 ZNF274Q96GC6 653 aaPredicted RBP13.17□□□□□ -0.3
SPC25-201ENST00000282074 LSM14BQ9BX40 385 aaKnown RBP13.17□□□□□ -0.3
SPC25-201ENST00000282074 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 PCDHGA5Q9Y5G8 931 aa13.17□□□□□ -0.3
SPC25-201ENST00000282074 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
SPC25-201ENST00000282074 ANKRD11Q6UB99 2663 aaPredicted RBP13.17□□□□□ -0.3
SPC25-201ENST00000282074 CCDC163A0A0D9SF12 145 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 MYBPHLA2RUH7 354 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 SPECC1L-ADORA2AF8WAN1 911 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 EIF5BO60841 1220 aaKnown RBP13.16□□□□□ -0.3
SPC25-201ENST00000282074 RPP40O75818 363 aaKnown RBP13.16□□□□□ -0.3
SPC25-201ENST00000282074 CDKL5O76039 1030 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 EPN2O95208 641 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 IGFBP6P24592 240 aaPredicted RBP13.16□□□□□ -0.3
SPC25-201ENST00000282074 YARSP54577 528 aaKnown RBP13.16□□□□□ -0.3
SPC25-201ENST00000282074 TWF1Q12792 350 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 CALCRLQ16602 461 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 UNQ6494/PRO21346Q6UXR6 183 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 Q6ZS52 159 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 TTC12Q9H892 705 aaPredicted RBP13.16□□□□□ -0.3
SPC25-201ENST00000282074 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 TOPORSQ9NS56 1045 aaPredicted RBP13.16□□□□□ -0.3
SPC25-201ENST00000282074 AFF4Q9UHB7 1163 aaKnown RBP13.16□□□□□ -0.3
SPC25-201ENST00000282074 FBXL5Q9UKA1 691 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 ZMIZ1Q9ULJ6 1067 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 TICRRQ7Z2Z1 1910 aa13.16□□□□□ -0.3
SPC25-201ENST00000282074 ZFYVE26Q68DK2 2539 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 GREB1Q4ZG55 1949 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 DPYSL4O14531 572 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 MOSPD3O75425 235 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 GJA1P17302 382 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 NAMPTP43490 491 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 SOX9P48436 509 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 EFNA5P52803 228 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 EPHA5P54756 1037 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 FCHO2Q0JRZ9 810 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 MRPL58Q14197 206 aaKnown RBP13.15□□□□□ -0.3
SPC25-201ENST00000282074 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 TEAD2Q15562 447 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 CCDC6Q16204 474 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 EEF1DP3Q658K8 133 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 RXFP3Q9NSD7 469 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 CEP72Q9P209 647 aa13.15□□□□□ -0.3
SPC25-201ENST00000282074 SPAG17Q6Q759 2223 aa13.14□□□□□ -0.31
SPC25-201ENST00000282074 A0A087WWV3 80 aa13.14□□□□□ -0.31
SPC25-201ENST00000282074 C1QTNF9BB2RNN3 333 aa13.14□□□□□ -0.31
SPC25-201ENST00000282074 PODXLO00592 558 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms