RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZFYVE27Q5T4F4 411 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 UBXN6Q9BZV1 441 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 RPF1Q9H9Y2 349 aaKnown RBP19.17■□□□□ 0.66
CAPN1-201ENST00000279247 TMEM59LQ9UK28 342 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 NFICP08651 508 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 PYGMP11217 842 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 GCLCP48506 637 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-201ENST00000279247 SLC26A2P50443 739 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 MCL1Q07820 350 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 SKIDA1Q1XH10 827 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 PLEKHH3Q7Z736 793 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 MCOLN2Q8IZK6 566 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 PARK7Q99497 189 aaKnown RBP19.16■□□□□ 0.66
CAPN1-201ENST00000279247 ZSWIM1Q9BR11 485 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 VTA1Q9NP79 307 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 ADAM22Q9P0K1 906 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 ABLIM1O14639 778 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 GAS2O43903 313 aaKnown RBP19.16■□□□□ 0.66
CAPN1-201ENST00000279247 CD19P15391 556 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 GABPB1Q06547 395 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-201ENST00000279247 ACVR2BQ13705 512 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 GLE1Q53GS7 698 aaKnown RBP19.16■□□□□ 0.66
CAPN1-201ENST00000279247 RASAL3Q86YV0 1011 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 WDR49Q8IV35 697 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 TINF2Q9BSI4 451 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 C16orf70Q9BSU1 422 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 FZD8Q9H461 694 aa19.16■□□□□ 0.66
CAPN1-201ENST00000279247 HOXC6P09630 235 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 UNGP13051 313 aaPredicted RBP19.15■□□□□ 0.66
CAPN1-201ENST00000279247 TMOD1P28289 359 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 PHKA2P46019 1235 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 PAK2Q13177 524 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 WDR72Q3MJ13 1102 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 PPTC7Q8NI37 304 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 O00370 1275 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 STRNO43815 780 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 TNNC2P02585 160 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 CYP1A2P05177 515 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 CYP2C19P33261 490 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 DNAJC21Q5F1R6 531 aaKnown RBP19.15■□□□□ 0.66
CAPN1-201ENST00000279247 TSHZ1Q6ZSZ6 1077 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 CARD9Q9H257 536 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 CISHQ9NSE2 258 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 PTPN22Q9Y2R2 807 aa19.15■□□□□ 0.66
CAPN1-201ENST00000279247 RNF40O75150 1001 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 ASS1P00966 412 aaKnown RBP19.14■□□□□ 0.66
CAPN1-201ENST00000279247 STAG3L1P0CL83 205 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 CYP2B6P20813 491 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 BPIFB4P59827 614 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 FKBP1BP68106 108 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 ANKRD23Q86SG2 305 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 RASGEF1CQ8N431 466 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 ZNF606Q8WXB4 792 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 C18orf8Q96DM3 657 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 GDF3Q9NR23 364 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 PLXNB2O15031 1838 aa19.14■□□□□ 0.66
CAPN1-201ENST00000279247 ARF4P18085 180 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-201ENST00000279247 GRIK4Q16099 956 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 SEL1L2Q5TEA6 688 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 KIAA0319LQ8IZA0 1049 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 ANKRD36BP1Q96IX9 119 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 KLHL11Q9NVR0 708 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 ADAM21Q9UKJ8 722 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 MYO1FO00160 1098 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 CES2O00748 559 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 TBXAS1P24557 533 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-201ENST00000279247 KCNJ1P48048 391 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 LMAN1P49257 510 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 C11orf63Q6NUN7 778 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 EXOC8Q8IYI6 725 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 C1orf131Q8NDD1 294 aaKnown RBP19.14■□□□□ 0.65
CAPN1-201ENST00000279247 RUFY1Q96T51 708 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 FAM118BQ9BPY3 351 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 NEUROG2Q9H2A3 272 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 ATP8B3O60423 1300 aa19.14■□□□□ 0.65
CAPN1-201ENST00000279247 GOLGA6L10A0A0M3HER8 536 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 LACTBL1A8MY62 500 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 ERLIN2O94905 339 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 ITGB3P05106 788 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 CDR1P51861 262 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 TAF1CQ15572 869 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-201ENST00000279247 CCL14Q16627 93 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 ZNF484Q5JVG2 852 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 JADE1Q6IE81 842 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 MTHFD1LQ6UB35 978 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.13■□□□□ 0.65
CAPN1-201ENST00000279247 ABRAQ8N0Z2 381 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 KATNBL1Q9H079 304 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 MKI67P46013 3256 aaKnown RBP19.13■□□□□ 0.65
CAPN1-201ENST00000279247 MROH7Q68CQ1 1323 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 SYF2O95926 243 aaKnown RBP19.13■□□□□ 0.65
CAPN1-201ENST00000279247 SNX1Q13596 522 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 GOLGA6L1Q8N7Z2 621 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 GTF3C2Q8WUA4 911 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-201ENST00000279247 MAGOHBQ96A72 148 aaKnown RBP19.13■□□□□ 0.65
CAPN1-201ENST00000279247 NIF3L1Q9GZT8 377 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 CENPHQ9H3R5 247 aa19.13■□□□□ 0.65
CAPN1-201ENST00000279247 AGPSO00116 658 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms