RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 NR1H3Q13133 447 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 UBE4AQ14139 1066 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 FASTKD3Q14CZ7 662 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 CFAP157Q5JU67 520 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLC10A5Q5PT55 438 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 PPP4R3CPQ6ZMV5 832 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 RNF111Q6ZNA4 994 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 VPS52Q8N1B4 723 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLC25A41Q8N5S1 370 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 PSPC1Q8WXF1 523 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 MCUR1Q96AQ8 359 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 PHF12Q96QT6 1004 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 PANX3Q96QZ0 392 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 FNBP1Q96RU3 617 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 PCDHB18PQ96TA0 734 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 RUSC1Q9BVN2 902 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SPZ1Q9BXG8 430 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 MAK16Q9BXY0 300 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 CRNKL1Q9BZJ0 848 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SUDS3Q9H7L9 328 aaPredicted RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 KCNK13Q9HB14 408 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 ALG13Q9NP73 1137 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 MINPP1Q9UNW1 487 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 ZNF831Q5JPB2 1677 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 ARFGEF1Q9Y6D6 1849 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 POC1B-GALNT4F8VUJ3 575 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 VILLO15195 856 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 TYROBPO43914 113 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 TRIM49P0CI25 452 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 TRIM49CP0CI26 452 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 RARBP10826 455 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 CRABP2P29373 138 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 HADHBP55084 474 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SFSWAPQ12872 951 aaKnown RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 MSLNQ13421 630 aaPredicted RBP9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SBK1Q52WX2 424 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SGO2Q562F6 1265 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 LVRNQ6Q4G3 990 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 NSMFQ6X4W1 530 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 CAPN12Q6ZSI9 719 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLCO2A1Q92959 643 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 SKA1Q96BD8 255 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 NSL1Q96IY1 281 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 TTC1Q99614 292 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 ANAPC5Q9UJX4 755 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 MTUS1Q9ULD2 1270 aa9.73□□□□□ -0.85
HMGCLL1-201ENST00000274901 TMEM221A6NGB7 291 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 MEIS1O00470 390 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 STK10O94804 968 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 CA4P22748 312 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 EIF4BP23588 611 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 PGM1P36871 562 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 CETN2P41208 172 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 RPS8P62241 208 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 SCN7AQ01118 1682 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 MPP3Q13368 585 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 PTK6Q13882 451 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 COG2Q14746 738 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 CLUL1Q15846 466 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 LRRC36Q1X8D7 754 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 SFT2D3Q587I9 215 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 HYIQ5T013 277 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 C12orf60Q5U649 245 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 PHLDB3Q6NSJ2 640 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 RIPOR1Q6ZS17 1223 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 RHOT2Q8IXI1 618 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 MIPOL1Q8TD10 442 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 ABTB1Q969K4 478 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 FAM161BQ96MY7 647 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 REEP2Q9BRK0 252 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 RAB34Q9BZG1 259 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 BMP2KQ9NSY1 1161 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 DDX25Q9UHL0 483 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 NEU2Q9Y3R4 380 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 EXOC1LA0A1B0GW35 172 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 SORBS3O60504 671 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 OPHN1O60890 802 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 TMCC1O94876 653 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 PGM3O95394 542 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 BAG2O95816 211 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 KRT18P05783 430 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 TSPY3P0CV98 308 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 TSPY8P0CW00 308 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 CCDC166P0CW27 439 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 HOXA7P31268 230 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 ADCY8P40145 1251 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 GALK1P51570 392 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 EMP3P54852 163 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 PABPC4Q13310 644 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 ORC2Q13416 577 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 LRRC6Q86X45 466 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 SMC1BQ8NDV3 1235 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 SLC5A5Q92911 643 aa9.72□□□□□ -0.85
HMGCLL1-201ENST00000274901 FAM84BQ96KN1 310 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms