RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PALM3A6NDB9 673 aaPredicted RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 TISP43B9A030 160 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 CCDC22O60826 627 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 PRKCIP41743 596 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 COG7P83436 770 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 LIN52Q52LA3 116 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 ZNF75CPQ92670 426 aaPredicted RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 INPP5DQ92835 1189 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 AGBL1Q96MI9 1066 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 BTBD10Q9BSF8 475 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 PCDHA3Q9Y5H8 950 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 EDF1O60869 148 aaKnown RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 GSTA2P09210 222 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 TROVE2P10155 538 aaKnown RBP eCLIP13.58□□□□□ -0.24
HERC6-202ENST00000273960 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 CHRNA5P30532 468 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 FXR2P51116 673 aaKnown RBP eCLIP13.58□□□□□ -0.24
HERC6-202ENST00000273960 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 EPHB1P54762 984 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 RASSF3Q86WH2 238 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 ZNF564Q8TBZ8 553 aaPredicted RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 SNF8Q96H20 258 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 SH2D3AQ9BRG2 576 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 CENPKQ9BS16 269 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 INTS2Q9H0H0 1204 aaKnown RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 ASCC2Q9H1I8 757 aaPredicted RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 C10orf88Q9H8K7 445 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PCYOX1Q9UHG3 505 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
HERC6-202ENST00000273960 A0A0A6YYK5 440 aaPredicted RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 SIGLEC16A6NMB1 481 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 E7ENQ6 273 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PI4K2BG5E9Z4 385 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 EDIL3O43854 480 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 ZNF189O75820 626 aaPredicted RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 SGPL1O95470 568 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 FAM163BP0C2L3 166 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 GCLMP48507 274 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 DRG2P55039 364 aaKnown RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 PLCB3Q01970 1234 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 C1orf146Q5VVC0 180 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 DPY19L2P1Q6NXN4 242 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 KCTD1Q719H9 257 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 ALYREFQ86V81 257 aaKnown RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 LCA5Q86VQ0 697 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 TRIM42Q8IWZ5 723 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 GRAMD1AQ96CP6 724 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 IFT43Q96FT9 208 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 KIAA1586Q9HCI6 787 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 TAS2R1Q9NYW7 299 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PACSIN3Q9UKS6 424 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PSMC4P43686 418 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 MOGSQ13724 837 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 TMEM119Q4V9L6 283 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PHLDB3Q6NSJ2 640 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 RGS9BPQ6ZS82 235 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PPM1KQ8N3J5 372 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PRPF31Q8WWY3 499 aaKnown RBP13.58□□□□□ -0.24
HERC6-202ENST00000273960 GATA6Q92908 595 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 SYNCQ9H7C4 482 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PDP2Q9P2J9 529 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 PCDHA2Q9Y5H9 948 aa13.58□□□□□ -0.24
HERC6-202ENST00000273960 NUP188Q5SRE5 1749 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 TTC36A6NLP5 189 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 CYP26A1O43174 497 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 ASMTLO95671 621 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 DESP17661 470 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 MAGEA4P43358 317 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 ARFIP2P53365 341 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 GPC5P78333 572 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 COBLL1Q53SF7 1204 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 ZBED8Q8IZ13 594 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 STARD13Q9Y3M8 1113 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 PCDHAC2Q9Y5I4 1007 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 LMNAP02545 664 aaKnown RBP13.57□□□□□ -0.24
HERC6-202ENST00000273960 CTNNA2P26232 953 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 RPL13P26373 211 aaKnown RBP13.57□□□□□ -0.24
HERC6-202ENST00000273960 FMO5P49326 533 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 JAM2P57087 298 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 NR1H3Q13133 447 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 TNFAIP8L3Q5GJ75 292 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 PCNX4Q63HM2 1172 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 PIP4K2CQ8TBX8 421 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 ACSF2Q96CM8 615 aaPredicted RBP13.57□□□□□ -0.24
HERC6-202ENST00000273960 NSL1Q96IY1 281 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 NDE1Q9NXR1 346 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 SLC17A7Q9P2U7 560 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 PPARGC1AQ9UBK2 798 aaKnown RBP13.57□□□□□ -0.24
HERC6-202ENST00000273960 PPM1HQ9ULR3 514 aa13.57□□□□□ -0.24
HERC6-202ENST00000273960 DNAJC6O75061 913 aa13.56□□□□□ -0.24
HERC6-202ENST00000273960 GAS8O95995 478 aa13.56□□□□□ -0.24
HERC6-202ENST00000273960 SETSIPP0DME0 302 aa13.56□□□□□ -0.24
HERC6-202ENST00000273960 MYL7Q01449 175 aa13.56□□□□□ -0.24
HERC6-202ENST00000273960 SPDYCQ5MJ68 293 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms