RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SMAD2Q15796 467 aaKnown RBP10.97□□□□□ -0.65
LRTM1-201ENST00000273286 UBE2SQ16763 222 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 KRTAP9-9Q9BYP9 154 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 KRTAP9-4Q9BYQ2 154 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.97□□□□□ -0.65
LRTM1-201ENST00000273286 COL1A2P08123 1366 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 MUC6Q6W4X9 2439 aa10.97□□□□□ -0.65
LRTM1-201ENST00000273286 MYO7AQ13402 2215 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 CCDC196A0A1B0GTZ2 297 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 GRM6O15303 877 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 ZBTB43O43298 467 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 HBP1O60381 514 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 SCG2P13521 617 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 CD52P31358 61 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 SREBF1P36956 1147 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 ZP2Q05996 745 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 FAM160B1Q5W0V3 765 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 WWC2Q6AWC2 1192 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 CCDC12Q8WUD4 166 aaPredicted RBP10.96□□□□□ -0.65
LRTM1-201ENST00000273286 FAM168AQ92567 244 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 CELF4Q9BZC1 486 aaKnown RBP10.96□□□□□ -0.65
LRTM1-201ENST00000273286 FAM49AQ9H0Q0 323 aaPredicted RBP10.96□□□□□ -0.65
LRTM1-201ENST00000273286 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 TCEAL9Q9UHQ7 104 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 PADI3Q9ULW8 664 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 TELO2Q9Y4R8 837 aa10.96□□□□□ -0.65
LRTM1-201ENST00000273286 IGKV6D-21A0A0A0MT36 114 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 MEIS1O00470 390 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 ZNF76P36508 570 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 SETQ01105 290 aaPredicted RBP10.95□□□□□ -0.66
LRTM1-201ENST00000273286 UBE3AQ05086 875 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 SMAD4Q13485 552 aaKnown RBP10.95□□□□□ -0.66
LRTM1-201ENST00000273286 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 BMP2KLQ5H9B9 411 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 HID1Q8IV36 788 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 PCYT2Q99447 389 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 ANO3Q9BYT9 981 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 AGO3Q9H9G7 860 aaKnown RBP10.95□□□□□ -0.66
LRTM1-201ENST00000273286 BARHL2Q9NY43 387 aa10.95□□□□□ -0.66
LRTM1-201ENST00000273286 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 SMCO2A6NFE2 343 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 LTBRP36941 435 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 SARSP49591 514 aaKnown RBP10.94□□□□□ -0.66
LRTM1-201ENST00000273286 LIG3P49916 1009 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 HYAL1Q12794 435 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 ZNF484Q5JVG2 852 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 SFRP5Q5T4F7 317 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 MIS18BP1Q6P0N0 1132 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 MTHFD1LQ6UB35 978 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 MFSD2AQ8NA29 543 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 ATP8B4Q8TF62 1192 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 AGO4Q9HCK5 861 aaKnown RBP10.94□□□□□ -0.66
LRTM1-201ENST00000273286 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 CD207Q9UJ71 328 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
LRTM1-201ENST00000273286 ESYT2A0FGR8 921 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 FAM86C2PA6NEL3 165 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 MBTPS2O43462 519 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 RPS6KA5O75582 802 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 EYA4O95677 639 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 KLRC1P26715 233 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 NDUFV1P49821 464 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 EXOSC10Q01780 885 aaKnown RBP10.93□□□□□ -0.66
LRTM1-201ENST00000273286 ITGB3BPQ13352 177 aaPredicted RBP10.93□□□□□ -0.66
LRTM1-201ENST00000273286 ADAM15Q13444 863 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 MEI1Q5TIA1 1274 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 ABHD15Q6UXT9 468 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 AGMOQ6ZNB7 445 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 SLC24A5Q71RS6 500 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
LRTM1-201ENST00000273286 EFHBQ8N7U6 833 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 LRRC2Q9BYS8 371 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 ALG13Q9NP73 1137 aaKnown RBP10.93□□□□□ -0.66
LRTM1-201ENST00000273286 ZNF302Q9NR11 478 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 PCDHB7Q9Y5E2 793 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 PCDHB12Q9Y5F1 795 aa10.93□□□□□ -0.66
LRTM1-201ENST00000273286 MRPL42Q9Y6G3 142 aaKnown RBP10.93□□□□□ -0.66
LRTM1-201ENST00000273286 DENND3A2RUS2 1198 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 GOLGA8AA7E2F4 631 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 GOLGA8BA8MQT2 603 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 STXBP3O00186 592 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 IPO5O00410 1097 aaKnown RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 ITGB1P05556 798 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 C8AP07357 584 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 CYP3A4P08684 503 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 SRGAP2BP0DMP2 458 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 ARP10275 920 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 GNA11P29992 359 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 COASYQ13057 564 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 PKN1Q16512 942 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 HERC4Q5GLZ8 1057 aaPredicted RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 PRAMEF13Q5VWM6 474 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 ZNF746Q6NUN9 644 aaPredicted RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 LETMD1Q6P1Q0 360 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 RTN4RL1Q86UN2 441 aaPredicted RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 PLA2G4DQ86XP0 818 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 MFSD4AQ8N468 514 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 CYP2W1Q8TAV3 490 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms