RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 C1orf127Q8N9H9 656 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 SPATA4Q8NEY3 305 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 TAF4BQ92750 862 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 KATNAL1Q9BW62 490 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 NIF3L1Q9GZT8 377 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 ASB7Q9H672 318 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 SIX4Q9UIU6 781 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 CENPFP49454 3210 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 TRIP11Q15643 1979 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 KRT19P08727 400 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 GNA15P30679 374 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 HADHBP55084 474 aaKnown RBP16.92■□□□□ 0.3
VPS26A-201ENST00000263559 CAP1Q01518 475 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 KYAT1Q16773 422 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 MFSD14CQ5VZR4 134 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 CATSPER4Q7RTX7 472 aa16.92■□□□□ 0.3
VPS26A-201ENST00000263559 ARGLU1Q9NWB6 273 aaPredicted RBP16.92■□□□□ 0.3
VPS26A-201ENST00000263559 C17orf102A2RUQ5 167 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 KCNK3O14649 394 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 CFHP08603 1231 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 DARSP14868 501 aaKnown RBP16.91■□□□□ 0.3
VPS26A-201ENST00000263559 PRKCZQ05513 592 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 CFAP221Q4G0U5 840 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 ACAP3Q96P50 834 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
VPS26A-201ENST00000263559 RNF14Q9UBS8 474 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 AMFRQ9UKV5 643 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 CD58P19256 250 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 ITIH3Q06033 890 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 TRIM32Q13049 653 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 NOGQ13253 232 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 GNASQ5JWF2 1037 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 C7orf31Q8N865 590 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 ZNF653Q96CK0 615 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 CYFIP2Q96F07 1278 aa16.91■□□□□ 0.3
VPS26A-201ENST00000263559 NPTXRO95502 500 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 CYP1A1P04798 512 aaPredicted RBP16.9■□□□□ 0.3
VPS26A-201ENST00000263559 CYP1A2P05177 515 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 WEE2P0C1S8 567 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 ZNF132P52740 706 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 GJA9P57773 515 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 CPA5Q8WXQ8 436 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 HES6Q96HZ4 224 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 PDCL3Q9H2J4 239 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 CISHQ9NSE2 258 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 GTF3C4Q9UKN8 822 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 MROH7Q68CQ1 1323 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 ITGB3P05106 788 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 EIF4BP23588 611 aaKnown RBP16.9■□□□□ 0.3
VPS26A-201ENST00000263559 SSTR3P32745 418 aaPredicted RBP16.9■□□□□ 0.3
VPS26A-201ENST00000263559 GRM5P41594 1212 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 ASPAP45381 313 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 SCARA5Q6ZMJ2 495 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 TMEM40Q8WWA1 233 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 ZNF446Q9NWS9 450 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 NXF1Q9UBU9 619 aaKnown RBP16.9■□□□□ 0.3
VPS26A-201ENST00000263559 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
VPS26A-201ENST00000263559 CES2O00748 559 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 THAP12O43422 761 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 PGK1P00558 417 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 HOXC8P31273 242 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 RNASE9P60153 205 aaKnown RBP16.89■□□□□ 0.29
VPS26A-201ENST00000263559 DCAF4L1Q3SXM0 396 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 SLC27A1Q6PCB7 646 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 MMGT1Q8N4V1 131 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 PBKQ96KB5 322 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 NUP85Q9BW27 656 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 EIF2AQ9BY44 585 aaKnown RBP16.89■□□□□ 0.29
VPS26A-201ENST00000263559 RAB21Q9UL25 225 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 ALG6Q9Y672 507 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 TMEM132DQ14C87 1099 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 ZNF394Q53GI3 561 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 NAA35Q5VZE5 725 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 PASD1Q8IV76 773 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 ZNF606Q8WXB4 792 aa16.89■□□□□ 0.29
VPS26A-201ENST00000263559 CALR3Q96L12 384 aaKnown RBP16.89■□□□□ 0.29
VPS26A-201ENST00000263559 CNOT8Q9UFF9 292 aaKnown RBP16.89■□□□□ 0.29
VPS26A-201ENST00000263559 MTA2O94776 668 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 TOMM70O94826 608 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 GUCY2FP51841 1108 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 SNX17Q15036 470 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 WDR72Q3MJ13 1102 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 NOTUMQ6P988 496 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 MCOLN2Q8IZK6 566 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 CXCL16Q9H2A7 254 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 SNTG2Q9NY99 539 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 GNAT1P11488 350 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 CENPCQ03188 943 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 CACNB2Q08289 660 aaPredicted RBP16.88■□□□□ 0.29
VPS26A-201ENST00000263559 PCBP1Q15365 356 aaKnown RBP eCLIP16.88■□□□□ 0.29
VPS26A-201ENST00000263559 DEFB115Q30KQ5 88 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 ZNF667Q5HYK9 610 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 TMCO3Q6UWJ1 677 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 CXCL17Q6UXB2 119 aa16.88■□□□□ 0.29
VPS26A-201ENST00000263559 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
VPS26A-201ENST00000263559 MTG1Q9BT17 334 aaPredicted RBP16.88■□□□□ 0.29
VPS26A-201ENST00000263559 CCDC94Q9BW85 323 aaPredicted RBP16.88■□□□□ 0.29
VPS26A-201ENST00000263559 RBM12Q9NTZ6 932 aaKnown RBP16.88■□□□□ 0.29
VPS26A-201ENST00000263559 DDX3YO15523 660 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms