RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MMTAG2Q9BU76 263 aaKnown RBP13.34□□□□□ -0.27
TRAF4-202ENST00000262396 BRD9Q9H8M2 597 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 PLEKHA5Q9HAU0 1116 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 ZFP14Q9HCL3 533 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 FBXL5Q9UKA1 691 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 UBQLN1Q9UMX0 589 aaKnown RBP13.34□□□□□ -0.27
TRAF4-202ENST00000262396 R4GN57 208 aa13.34□□□□□ -0.27
TRAF4-202ENST00000262396 ZFHX2Q9C0A1 2572 aaPredicted RBP13.33□□□□□ -0.27
TRAF4-202ENST00000262396 ARHGEF37A1IGU5 675 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 WDR27A2RRH5 827 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 PROZP22891 400 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 IGFBP6P24592 240 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-202ENST00000262396 ABCD1P33897 745 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 SLC12A3P55017 1021 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 MCL1Q07820 350 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 TWF1Q12792 350 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 PLD1Q13393 1074 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 ZBTB41Q5SVQ8 909 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 ARMCX5Q6P1M9 558 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 ZNF852Q6ZMS4 543 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 TPRG1Q6ZUI0 275 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 TAS1R3Q7RTX0 852 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 YAF2Q8IY57 180 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 SUSD3Q96L08 255 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 PNMA5Q96PV4 448 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 MSTO1Q9BUK6 570 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 PARVGQ9HBI0 331 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 ASAH2Q9NR71 780 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 TUBGCP4Q9UGJ1 667 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 AFF4Q9UHB7 1163 aaKnown RBP13.33□□□□□ -0.28
TRAF4-202ENST00000262396 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 INSL5Q9Y5Q6 135 aa13.33□□□□□ -0.28
TRAF4-202ENST00000262396 VPS37CA5D8V6 355 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-202ENST00000262396 SLC26A4O43511 780 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 KINO60870 393 aaKnown RBP13.32□□□□□ -0.28
TRAF4-202ENST00000262396 ECI2O75521 394 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 CEBPBP17676 345 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 SCP2P22307 547 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 TXLNAP40222 546 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 ALDH1A3P47895 512 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 EPHB3P54753 998 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 STARD6P59095 220 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 TAF12Q16514 161 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 SLC10A6Q3KNW5 377 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 HYIQ5T013 277 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 TCEAL8Q8IYN2 117 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
TRAF4-202ENST00000262396 LEMD2Q8NC56 503 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 FAM200AQ8TCP9 573 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 NELL2Q99435 816 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 TRMT61BQ9BVS5 477 aaKnown RBP13.32□□□□□ -0.28
TRAF4-202ENST00000262396 OXCT2Q9BYC2 517 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-202ENST00000262396 CCDC39Q9UFE4 941 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 MAFFQ9ULX9 164 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 TIMM13Q9Y5L4 95 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-202ENST00000262396 CACNA1HO95180 2353 aa13.32□□□□□ -0.28
TRAF4-202ENST00000262396 MTCL1Q9Y4B5 1905 aaKnown RBP13.31□□□□□ -0.28
TRAF4-202ENST00000262396 DPYSL4O14531 572 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 OGTO15294 1046 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 TRAK2O60296 914 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 ABLIM3O94929 683 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 SP9P0CG40 484 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 CD72P21854 359 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
TRAF4-202ENST00000262396 MAGEA9P43362 315 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 NCKAP1LP55160 1127 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
TRAF4-202ENST00000262396 GRM2Q14416 872 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 CD300LGQ6UXG3 332 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 BRAPQ7Z569 592 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 METTL23Q86XA0 190 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 ATRIPQ8WXE1 791 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 SECISBP2LQ93073 1101 aaKnown RBP13.31□□□□□ -0.28
TRAF4-202ENST00000262396 ELSPBP1Q96BH3 223 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 PGLYRP2Q96PD5 576 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 REEP2Q9BRK0 252 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 TBX20Q9UMR3 447 aa13.31□□□□□ -0.28
TRAF4-202ENST00000262396 NDRG2Q9UN36 371 aaKnown RBP13.31□□□□□ -0.28
TRAF4-202ENST00000262396 OR6C75A6NL08 312 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 LACTBL1A8MY62 500 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 MAN2B1O00754 1011 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 ZNF263O14978 683 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 LRRN2O75325 713 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 SEC24AO95486 1093 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 ODC1P11926 461 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 PLCG1P19174 1290 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 CYP3A5P20815 502 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 PDCP20941 246 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 TNFSF9P41273 254 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 ID4P47928 161 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 MCM6Q14566 821 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 PPP2R5DQ14738 602 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
TRAF4-202ENST00000262396 SLC5A9Q2M3M2 681 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 TMEM119Q4V9L6 283 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 ADALQ6DHV7 355 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 TANGO2Q6ICL3 276 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms