RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 NID2Q14112 1375 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 NALCNQ8IZF0 1738 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 MED1Q15648 1581 aaPredicted RBP16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 KRT1P04264 644 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 INHBAP08476 426 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 TBC1D9BQ66K14 1250 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 CFAP36Q96G28 342 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 BTBD10Q9BSF8 475 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 LMCD1Q9NZU5 365 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 LRRC42Q9Y546 428 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 FAM237BA0A1B0GVD1 139 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 CYTH1Q15438 398 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 ACBD5Q5T8D3 534 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 CYFIP1Q7L576 1253 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 ALYREFQ86V81 257 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 SLFN12Q8IYM2 578 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 IFT122Q9HBG6 1241 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 ASTN1O14525 1302 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 DISP2A7MBM2 1401 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 SMAPO00193 183 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 CFLARO15519 480 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 NPTXRO95502 500 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 POTEJP0CG39 1038 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 RTP1P59025 263 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 DSG1Q02413 1049 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 WASHC2DQ5SRD0 308 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 CBWD1Q9BRT8 395 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 MANSC1Q9H8J5 431 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 SIX2Q9NPC8 291 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 SLC17A7Q9P2U7 560 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 ZWINTO95229 277 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 AP2B1P63010 937 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 LPCAT4Q643R3 524 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 C3orf62Q6ZUJ4 267 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 ASRGL1Q7L266 308 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 NOP9Q86U38 636 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 NEDD1Q8NHV4 660 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 AK5Q9Y6K8 562 aa16.82■□□□□ 0.28
PRPF40B-201ENST00000261897 LOC102724428A0A0B4J2F2 783 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 ERVV-1B6SEH8 477 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 LIN7AO14910 233 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 MAP3K6O95382 1288 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 GDF11O95390 407 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 LYNP07948 512 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 ALADP13716 330 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 VAMP7P51809 220 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 SIK1P57059 783 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 TFDP1Q14186 410 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 PRPF39Q86UA1 669 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 MYLK4Q86YV6 388 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 TOPORSQ9NS56 1045 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 PCYOX1Q9UHG3 505 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 APPL1Q9UKG1 709 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 SPECC1L-ADORA2AF8WAN1 911 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 OR6B1O95007 311 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 STAMBPO95630 424 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 GYS1P13807 737 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 NPEPPSP55786 919 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 KCTD21Q4G0X4 260 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 RNF168Q8IYW5 571 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 GALNT4Q8N4A0 578 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 PPM1NQ8N819 430 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 SH3TC2Q8TF17 1288 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 SLC7A6OSQ96CW6 309 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 PCDHB18PQ96TA0 734 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 FCHO1O14526 889 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 TNNI1P19237 187 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 NR1H3Q13133 447 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 RASA2Q15283 850 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 MAPK6Q16659 721 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 RINLQ6ZS11 566 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 RSAD2Q8WXG1 361 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 TMEM121Q9BTD3 319 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 ZWILCHQ9H900 591 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 RAB20Q9NX57 234 aa16.81■□□□□ 0.28
PRPF40B-201ENST00000261897 GSC2O15499 205 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 EDF1O60869 148 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 RASA3Q14644 834 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 CNPY1Q3B7I2 92 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 ASPRV1Q53RT3 343 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 CENPUQ71F23 418 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 RSPH3Q86UC2 560 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 OSBPL8Q9BZF1 889 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 AGPAT3Q9NRZ7 376 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 PDP2Q9P2J9 529 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 MAD1L1Q9Y6D9 718 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 ZBTB5O15062 677 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 GSTA2P09210 222 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 GNAZP19086 355 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 MTHFD1LQ6UB35 978 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 MIPEPQ99797 713 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 KIFC3Q9BVG8 833 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 NFAT5O94916 1531 aa16.8■□□□□ 0.28
PRPF40B-201ENST00000261897 MYH3P11055 1940 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms