RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 RIT2Q99578 217 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 MGRN1O60291 552 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 NSFP46459 744 aaKnown RBP15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 ALDH5A1P51649 535 aaPredicted RBP15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 TKFCQ3LXA3 575 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 ATP13A4Q4VNC1 1196 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 SPDYCQ5MJ68 293 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 SPATA21Q7Z572 469 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 ZNF280CQ8ND82 737 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 TAAR1Q96RJ0 339 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 NAALADL1Q9UQQ1 740 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 KRT10P13645 584 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 NPTX2P47972 431 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 DMP1Q13316 513 aaPredicted RBP15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 VSTM1Q6UX27 236 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 HELQQ8TDG4 1101 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 KCNV2Q8TDN2 545 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 AGAP11Q8TF27 550 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 NSMCE1Q8WV22 266 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 CEP170P1Q96L14 293 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 R3HDMLQ9H3Y0 253 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 KLHL14Q9P2G3 628 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 UVRAGQ9P2Y5 699 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 MCM8Q9UJA3 840 aa15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.39■□□□□ 0.05
SFSWAP-201ENST00000261674 KRT15P19012 456 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 PITPNM3Q9BZ71 974 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 TBX20Q9UMR3 447 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 GOLGA8SH3BPF8 625 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 GOLGA8MH3BSY2 632 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 SKAP2O75563 359 aaPredicted RBP15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 CYP1A2P05177 515 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ZSCAN5DPP0CG00 497 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 CETPP11597 493 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ITIH2P19823 946 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ACOT2P49753 483 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 IZUMO3Q5VZ72 239 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 VSIG1Q86XK7 387 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 RMDN2Q96LZ7 410 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 CCDC77Q9BR77 488 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 STRA6Q9BX79 667 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 LRRC19Q9H756 370 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 C1orf112Q9NSG2 853 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 NINJ2Q9NZG7 142 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ZNF148Q9UQR1 794 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 RIPK3Q9Y572 518 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ATP8B3O60423 1300 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ANP32DO95626 131 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 CFHP08603 1231 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 NQO1P15559 274 aaKnown RBP15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 HADHBP55084 474 aaKnown RBP15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 NCALDP61601 193 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 DNAJC3Q13217 504 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 FAM182AQ5T1J6 154 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 FITM2Q8N6M3 262 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 SPOCK2Q92563 424 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 FNBP1Q96RU3 617 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 LBHD1Q9BQE6 289 aaPredicted RBP15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ROPN1BQ9BZX4 212 aaPredicted RBP15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 ROPN1Q9HAT0 212 aaPredicted RBP15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 SAYSD1Q9NPB0 183 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 A1CFQ9NQ94 594 aaKnown RBP15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 CEP83Q9Y592 693 aa15.38■□□□□ 0.05
SFSWAP-201ENST00000261674 P4HA2O15460 535 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 DIAPH2O60879 1101 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 CELF2O95319 508 aaKnown RBP15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 KRT16P08779 473 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 ATP5DP30049 168 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 MRPS9P82933 396 aaKnown RBP15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 C4orf33Q8N1A6 199 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 PSPC1Q8WXF1 523 aaKnown RBP15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 SERPINB12Q96P63 405 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 RANBP17Q9H2T7 1088 aaKnown RBP15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 VPS37BQ9H9H4 285 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 SLC12A4Q9UP95 1085 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 EXOC7Q9UPT5 735 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 WDR91A4D1P6 747 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 FSCN2O14926 492 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 BACE1P56817 501 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 ATL2Q8NHH9 583 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 RBM15Q96T37 977 aaKnown RBP eCLIP15.37■□□□□ 0.051e-7■■■■□ 22
SFSWAP-201ENST00000261674 KIF9Q9HAQ2 790 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 ETNK1Q9HBU6 452 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 TMEM8AQ9HCN3 771 aa15.37■□□□□ 0.05
SFSWAP-201ENST00000261674 DHX15O43143 795 aaKnown RBP15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 TBC1D12O60347 775 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 ETS1P14921 441 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 GTF2BQ00403 316 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 CYP1B1Q16678 543 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 P3H1Q32P28 736 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 SEZ6Q53EL9 994 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 ZNF394Q53GI3 561 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 WDR44Q5JSH3 913 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 KCTD17Q8N5Z5 321 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 MORC4Q8TE76 937 aa15.36■□□□□ 0.05
SFSWAP-201ENST00000261674 DCLK3Q9C098 648 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms