RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 TTLL13PA6NNM8 815 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 E7EVH7 732 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 DNM1LO00429 736 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 IQCF3P0C7M6 154 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 SETSIPP0DME0 302 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 GARTP22102 1010 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 TRIM14Q14142 442 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 KIZQ2M2Z5 673 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 ACCSLQ4AC99 568 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 CCDC181Q5TID7 509 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 ZPBP2Q6X784 338 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 ZSWIM2Q8NEG5 633 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 JAKMIP2Q96AA8 810 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 OSBPL7Q9BZF2 842 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 METTL14Q9HCE5 456 aaKnown RBP20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 GUCA1BQ9UMX6 200 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 ANO9A1A5B4 782 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 FERP16591 822 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 CDC42EP1Q00587 391 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 SNX1Q13596 522 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 VWA3BQ502W6 1294 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 TAF2Q6P1X5 1199 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 VTI1AQ96AJ9 217 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 GLT1D1Q96MS3 346 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 ADAMTS10Q9H324 1103 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 STYXL1Q9Y6J8 313 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 CITO14578 2027 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 ACKR2O00590 384 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 GPR32O75388 356 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 CSDE1O75534 798 aaKnown RBP20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 CCL5P13501 91 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 TNFRSF8P28908 595 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 LBX1P52954 281 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 UBXN1Q04323 297 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 MYO1EQ12965 1108 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 ITGA7Q13683 1181 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 ZNF662Q6ZS27 426 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 CD302Q8IX05 232 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 NDST4Q9H3R1 872 aa20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 PRMT7Q9NVM4 692 aaPredicted RBP20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL4A3BP-201ENST00000261415 HMGB1P1B2RPK0 211 aaPredicted RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 ATP1A1P05023 1023 aaKnown RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 ELF3P78545 371 aaPredicted RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 CWF19L1Q69YN2 538 aaKnown RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 RDH13Q8NBN7 331 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 ZBTB45Q96K62 511 aaPredicted RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 DEFB118Q96PH6 123 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 ACO2Q99798 780 aaKnown RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 RNF208Q9H0X6 261 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 KDM4CQ9H3R0 1056 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 ANKFY1Q9P2R3 1169 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 A0A1W2PQ45 241 aaPredicted RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 A0A1W2PQY0 241 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 GOLGA8IPA6NC78 632 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 GOLGA8JA6NMD2 632 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 GYPCP04921 128 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 SEC24CP53992 1094 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 PRPF4BQ13523 1007 aaKnown RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 FAM187BQ17R55 369 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 THEMIS2Q5TEJ8 643 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 SLFN12LQ6IEE8 588 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 CCDC170Q8IYT3 715 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 ZNF513Q8N8E2 541 aaPredicted RBP20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 CAPZA3Q96KX2 299 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 HAPLN2Q9GZV7 340 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 ABHD10Q9NUJ1 306 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 GINS2Q9Y248 185 aa20.22■□□□□ 0.83
COL4A3BP-201ENST00000261415 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 KBTBD13C9JR72 458 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 ENC1O14682 589 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 B4GALT5O43286 388 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 PPFIA2O75334 1257 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 LUC7L3O95232 432 aaKnown RBP20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 HSPA1AP0DMV8 641 aaKnown RBP20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 HSPA1BP0DMV9 641 aaKnown RBP20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 PAPOLAP51003 745 aaKnown RBP20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 ROR2Q01974 943 aaKnown RBP20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 FBXO46Q6PJ61 603 aaPredicted RBP20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 TRIM74Q86UV6 250 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 TRIM73Q86UV7 250 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 SERINC5Q86VE9 423 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 NME8Q8N427 588 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 SH2D3CQ8N5H7 860 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 FBXL18Q96ME1 805 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 ZIM3Q96PE6 472 aa20.21■□□□□ 0.83
COL4A3BP-201ENST00000261415 GMNCA6NCL1 334 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 TULP1O00294 542 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 MAPK13O15264 365 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 TOM1L1O75674 476 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 SNRNP35Q16560 246 aaKnown RBP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 AMHR2Q16671 573 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 DCAF17Q5H9S7 520 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 APLFQ8IW19 511 aaPredicted RBP20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 GPD1LQ8N335 351 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 TBC1D31Q96DN5 1066 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 OSMRQ99650 979 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 NUP58Q9BVL2 599 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 CDHR5Q9HBB8 845 aa20.2■□□□□ 0.82
COL4A3BP-201ENST00000261415 NOP53Q9NZM5 478 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms