RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GRID1Q9ULK0 1009 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 DNHD1Q96M86 4753 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 LACTBL1A8MY62 500 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 EIF3DO15371 548 aaKnown RBP eCLIP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 DARSP14868 501 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 CDK17Q00537 523 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 MPP2Q14168 576 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SUZ12Q15022 739 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 MANEALQ5VSG8 457 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 OLFML1Q6UWY5 402 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 NPWQ8N729 165 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SPC24Q8NBT2 197 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 SMIM14Q96QK8 99 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 KCNK16Q96T55 309 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 GPR62Q9BZJ7 368 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 THAP2Q9H0W7 228 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 GRHL1Q9NZI5 618 aa6.16□□□□□ -1.42
TOPBP1-201ENST00000260810 A0A1W2PQJ5 194 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 SLC15A5A6NIM6 579 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 C1QTNF8P60827 252 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 BFSP1Q12934 665 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 FILIP1Q7Z7B0 1213 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 SCD5Q86SK9 330 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 TLK2Q86UE8 772 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 SULF1Q8IWU6 871 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 TSEN2Q8NCE0 465 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 CNNM3Q8NE01 707 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 DNAJB3Q8WWF6 145 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 MTMR12Q9C0I1 747 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 MROH8Q9H579 483 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 CCDC196A0A1B0GTZ2 297 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 TCRBV7S3A2A0A539 114 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 ATF6P18850 670 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 MUTP22033 750 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 GPR15P49685 360 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 MRE11P49959 708 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 ZNF157P51786 506 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 MYL6P60660 151 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 TRDNQ13061 729 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 SNRNP35Q16560 246 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 KIAA0753Q2KHM9 967 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 PDXDC1Q6P996 788 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 TRMT1LQ7Z2T5 733 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 NT5DC3Q86UY8 548 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 OSMRQ99650 979 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 SYNPO2LQ9H987 977 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 ARHGEF10LQ9HCE6 1279 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 C6orf50Q9HD87 102 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 ANKEF1Q9NU02 776 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 L1RE1Q9UN81 338 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 PIEZO1Q92508 2521 aa6.15□□□□□ -1.42
TOPBP1-201ENST00000260810 ARNTLO00327 626 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 USO1O60763 962 aaKnown RBP6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 GTF2A2P52657 109 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 GDF10P55107 478 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 POU5F1BQ06416 359 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 TTLL4Q14679 1199 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 JADE1Q6IE81 842 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 CYHR1Q6ZMK1 362 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 DHX37Q8IY37 1157 aaKnown RBP6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 BEST2Q8NFU1 509 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 LTBRP36941 435 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 ACLYP53396 1101 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 PSMC5P62195 406 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 MSS51Q4VC12 460 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 PAPD7Q5XG87 772 aaKnown RBP6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 COLGALT2Q8IYK4 626 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 ACVR1CQ8NER5 493 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 SHKBP1Q8TBC3 707 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 SCFD2Q8WU76 684 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 CENPIQ92674 756 aaPredicted RBP6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 DCPSQ96C86 337 aaKnown RBP6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 MYO19Q96H55 970 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 SCLYQ96I15 445 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 THAP9Q9H5L6 903 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 HAUS4Q9H6D7 363 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 C10orf88Q9H8K7 445 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 CSNK1G1Q9HCP0 422 aa6.15□□□□□ -1.43
TOPBP1-201ENST00000260810 MYO1BO43795 1136 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 OFD1O75665 1012 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 CAPN15O75808 1086 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PRKAR2AP13861 404 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 CYP2B6P20813 491 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 NOMO3P69849 1222 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 TNFAIP1Q13829 316 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PSMD6Q15008 389 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 IGDCC3Q8IVU1 814 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 MLKLQ8NB16 471 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 CCDC47Q96A33 483 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 ZBTB9Q96C00 473 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 NOC4LQ9BVI4 516 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 TSPY26PQ9H489 355 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 KMT5AQ9NQR1 393 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 C2orf42Q9NWW7 574 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 MED16Q9Y2X0 877 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 PCYT1BQ9Y5K3 369 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 KLKB1P03952 638 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 TPM2P07951 284 aa6.14□□□□□ -1.43
TOPBP1-201ENST00000260810 HMGA1P17096 107 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms