RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 IP6K2Q9UHH9 426 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 USP31Q70CQ4 1352 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZSCAN5CA6NGD5 496 aaPredicted RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 CLPTM1O96005 669 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 TFDP2Q14188 446 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 OASLQ15646 514 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 PLEKHA7Q6IQ23 1121 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 RWDD4Q6NW29 188 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 COL23A1Q86Y22 540 aaPredicted RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 DNAAF5Q86Y56 855 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ARID3BQ8IVW6 561 aaPredicted RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF555Q8NEP9 628 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 DHX38Q92620 1227 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 SPATA17Q96L03 361 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 DNAJC7Q99615 494 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF341Q9BYN7 854 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 RPF1Q9H9Y2 349 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 A0A087X0T9 212 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 LINC00854A0A1B0GVQ3 168 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 GLI1P08151 1106 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM228BP0C875 321 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 C16orf89Q6UX73 402 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ERGIC2Q96RQ1 377 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 COQ7Q99807 217 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 F5H6K3 240 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 TPST1O60507 370 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 FMO5P49326 533 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 KLRC3Q07444 240 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 DMC1Q14565 340 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 FUKQ8N0W3 1084 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 NEDD1Q8NHV4 660 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZCWPW1Q9H0M4 648 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 CYP26B1Q9NR63 512 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 SEPT3Q9UH03 358 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 CSADQ9Y600 493 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 OPLAHO14841 1288 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 COMTP21964 271 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 POTEAQ6S8J7 498 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMC5Q6UXY8 1006 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 CCDC81Q6ZN84 652 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 CYFIP1Q7L576 1253 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 HDAC7Q8WUI4 952 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 C2CD2Q9Y426 696 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ATP4AP20648 1035 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 CRKP46108 304 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 SESN2P58004 480 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM47CQ5HY64 1035 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 THEMIS2Q5TEJ8 643 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 RCSD1Q6JBY9 416 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 C3orf62Q6ZUJ4 267 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 NOP9Q86U38 636 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 MFN1Q8IWA4 741 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ELOA2Q8IYF1 753 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 SENP7Q9BQF6 1050 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 MRPL1Q9BYD6 325 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMEM117Q9H0C3 514 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 IL1RAPL1Q9NZN1 696 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 PLAGL2Q9UPG8 496 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 PTPRMP28827 1452 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF335Q9H4Z2 1342 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZBTB39O15060 712 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 USP11P51784 963 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 EIF3EP60228 445 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 C16orf72Q14CZ0 275 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF667Q5HYK9 610 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 PAPD7Q5XG87 772 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 CLEC4GQ6UXB4 293 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 FOXP4Q8IVH2 680 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 C18orf8Q96DM3 657 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 CMTM5Q96DZ9 223 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 MKNK1Q9BUB5 465 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 PABPC3Q9H361 631 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 TDRD3Q9H7E2 651 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 RAVER2Q9HCJ3 691 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 XPO7Q9UIA9 1087 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 APPL1Q9UKG1 709 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ALG6Q9Y672 507 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 CCDC78A2IDD5 438 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 KLHL2O95198 593 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 CALB1P05937 261 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ELF3P78545 371 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 SLFN12LQ6IEE8 588 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 SCUBE1Q8IWY4 988 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 RMDN3Q96TC7 470 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 LRRC4Q9HBW1 653 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 HSPBP1Q9NZL4 362 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM153AQ9UHL3 310 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 A0A0U1RQJ8 604 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 R3HDM1Q15032 1099 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF699Q32M78 642 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 Q3C1V9 767 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 DCAF15Q66K64 600 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ASNSD1Q9NWL6 643 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ANGPT2O15123 496 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ATP9BO43861 1147 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF200P98182 395 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 TRIM25Q14258 630 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 MAPRE2Q15555 327 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms