RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RBP5P82980 135 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 CETN1Q12798 172 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 TRPC3Q13507 836 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 BTG3Q14201 252 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 SYCP1Q15431 976 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 UPP1Q16831 310 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 CMTR2Q8IYT2 770 aaKnown RBP17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 ERGIC2Q96RQ1 377 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 ZBED2Q9BTP6 218 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 INTS2Q9H0H0 1204 aaKnown RBP17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 CWH43Q9H720 699 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 SIK3Q9Y2K2 1263 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 PODXLO00592 558 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 ZC3H11AO75152 810 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 PON1P27169 355 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 APBA1Q02410 837 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 MLLT1Q03111 559 aaPredicted RBP17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 DPY19L2P1Q6NXN4 242 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 TRIM65Q6PJ69 517 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 EHBP1Q8NDI1 1231 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 C3orf58Q8NDZ4 430 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 XYLT2Q9H1B5 865 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 INSL6Q9Y581 213 aa17.02■□□□□ 0.32
CCDC90B-201ENST00000260054 F8W810 466 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 TPM3P06753 285 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 RPL9P32969 192 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 BMP8BP34820 402 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 UROC1Q96N76 676 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 RAD9AQ99638 391 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 APOBEC3GQ9HC16 384 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 SCN1AP35498 2009 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 A0A1W2PQC6 194 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 TLL1O43897 1013 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 ADCY5O95622 1261 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 ASS1P00966 412 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 PBX3P40426 434 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 OR1G1P47890 313 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 SLC11A1P49279 550 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 RABGGTBP53611 331 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 LRMPQ12912 555 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 SGSM1Q2NKQ1 1148 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 LRRC52Q8N7C0 313 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 DDX27Q96GQ7 796 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 MRFAP1L1Q96HT8 127 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 HPDLQ96IR7 371 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 LSM14BQ9BX40 385 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 SIX2Q9NPC8 291 aa17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-201ENST00000260054 LAMA3Q16787 3333 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 LCHNA4D1U4 455 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 NRP1O14786 923 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 SPTLC1O15269 473 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 KIF4AO95239 1232 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 ITGB1P05556 798 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 LINC00271P0C7V0 271 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 ZNF699Q32M78 642 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 CD300LGQ6UXG3 332 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 TMEM175Q9BSA9 504 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 PRG3Q9Y2Y8 225 aaPredicted RBP17■□□□□ 0.31
CCDC90B-201ENST00000260054 NUB1Q9Y5A7 615 aa17■□□□□ 0.31
CCDC90B-201ENST00000260054 EPHB6O15197 1021 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 B3GAT3O94766 335 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 STAU1O95793 577 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 GALTP07902 379 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 ATICP31939 592 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 PNPLA4P41247 253 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 TAF6P49848 677 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 BCAR1P56945 870 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 LILRA4P59901 499 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 NOP14P78316 857 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 WDR44Q5JSH3 913 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 PHLDB3Q6NSJ2 640 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 GJB7Q6PEY0 223 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 DCLRE1AQ6PJP8 1040 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 VSTM4Q8IW00 320 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 HASPINQ8TF76 798 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 TAF4BQ92750 862 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 TATDN2Q93075 761 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 ZNF560Q96MR9 790 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 IMPG2Q9BZV3 1241 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 PRO3102Q9H379 93 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 VRTNQ9H8Y1 702 aa16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 FAM207AQ9NSI2 230 aaPredicted RBP16.99■□□□□ 0.31
CCDC90B-201ENST00000260054 NT5C1B-RDH14C9J2C7 533 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 NOL4O94818 638 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 CLSTN1O94985 981 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 ALDH2P05091 517 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 MYOGP15173 224 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 MYO1EQ12965 1108 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 WDR72Q3MJ13 1102 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 SPOUT1Q5T280 376 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 CHRDL2Q6WN34 429 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 TMEM173Q86WV6 379 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms