RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SAMD9Q5K651 1589 aa6.46□□□□□ -1.38
TRA2B-201ENST00000259043 KLHL11Q9NVR0 708 aa6.46□□□□□ -1.38
TRA2B-201ENST00000259043 FBXO34Q9NWN3 711 aa6.46□□□□□ -1.38
TRA2B-201ENST00000259043 IQSEC2Q5JU85 1478 aa6.46□□□□□ -1.38
TRA2B-201ENST00000259043 GPR32O75388 356 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 KATNA1O75449 491 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 PRSS23O95084 383 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 NDUFA10O95299 355 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 RAP2AP10114 183 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 ATP5JP18859 108 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 EVA1CP58658 441 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 PTPAQ15257 358 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 ABCB5Q2M3G0 1257 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 MED25Q71SY5 747 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 PPM1NQ8N819 430 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 CPEB3Q8NE35 698 aaKnown RBP6.45□□□□□ -1.38
TRA2B-201ENST00000259043 CCHCR1Q8TD31 782 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 TMEM140Q9NV12 185 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 MKS1Q9NXB0 559 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 INTUQ9ULD6 942 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 MAGI2Q86UL8 1455 aa6.45□□□□□ -1.38
TRA2B-201ENST00000259043 SETD1BQ9UPS6 1966 aaKnown RBP6.44□□□□□ -1.38
TRA2B-201ENST00000259043 CCDC78A2IDD5 438 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 NUDT3O95989 172 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 LMNAP02545 664 aaKnown RBP6.44□□□□□ -1.38
TRA2B-201ENST00000259043 CFIP05156 583 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 SPATA31D3P0C874 917 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 SLC6A2P23975 617 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 ZEB1P37275 1124 aaPredicted RBP6.44□□□□□ -1.38
TRA2B-201ENST00000259043 UBXN2BQ14CS0 331 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 PCBP2Q15366 365 aaKnown RBP eCLIP6.44□□□□□ -1.38
TRA2B-201ENST00000259043 CLUL1Q15846 466 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 SPATA31D4Q6ZUB0 917 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.44□□□□□ -1.38
TRA2B-201ENST00000259043 OR56A1Q8NGH5 318 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 GPR150Q8NGU9 434 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 FUBP3Q96I24 572 aaKnown RBP eCLIP6.44□□□□□ -1.38
TRA2B-201ENST00000259043 SERHL2Q9H4I8 314 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 MANSC1Q9H8J5 431 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 ANKFY1Q9P2R3 1169 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 IPPQ9Y573 584 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 FPGT-TNNI3KV9GXZ4 949 aa6.44□□□□□ -1.38
TRA2B-201ENST00000259043 MYBBP1AQ9BQG0 1328 aaKnown RBP6.44□□□□□ -1.38
TRA2B-201ENST00000259043 ATP10AO60312 1499 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 TEX33O43247 280 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 POMCP01189 267 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 MYBL2P10244 700 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 DDCP20711 480 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 GCSHP23434 173 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 EDNRBP24530 442 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 MRPS21P82921 87 aaKnown RBP6.43□□□□□ -1.38
TRA2B-201ENST00000259043 ITKQ08881 620 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 B3GNTL1Q67FW5 361 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-201ENST00000259043 ZNF529Q6P280 563 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 DCBLD1Q8N8Z6 715 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 PHACTR3Q96KR7 559 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 C7orf25Q9BPX7 421 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 WDR11Q9BZH6 1224 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 SYBUQ9NX95 663 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 ATP11BQ9Y2G3 1177 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 MAP3K2Q9Y2U5 619 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 WASHC2CQ9Y4E1 1318 aa6.43□□□□□ -1.38
TRA2B-201ENST00000259043 UHRF1BP1Q6BDS2 1440 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 KLHL33A6NCF5 533 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 ALG1L2C9J202 215 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 IBSPP21815 317 aaPredicted RBP6.42□□□□□ -1.38
TRA2B-201ENST00000259043 OCA2Q04671 838 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 SCAPQ12770 1279 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 TARDBPQ13148 414 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRA2B-201ENST00000259043 FAM50AQ14320 339 aaKnown RBP6.42□□□□□ -1.38
TRA2B-201ENST00000259043 DACT2Q5SW24 774 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 TSHZ3Q63HK5 1081 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 Q6YL49 198 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 PRIMA1Q86XR5 153 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 BEND2Q8NDZ0 799 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 MTMR8Q96EF0 704 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 TEKT5Q96M29 485 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 PCDH12Q9NPG4 1184 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 PTGFRNQ9P2B2 879 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 PACSIN3Q9UKS6 424 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 LIMCH1Q9UPQ0 1083 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 RUVBL1Q9Y265 456 aaKnown RBP6.42□□□□□ -1.38
TRA2B-201ENST00000259043 TNKSO95271 1327 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 C3P01024 1663 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 NCOA1Q15788 1441 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 C9orf84Q5VXU9 1444 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 SCAPERQ9BY12 1400 aa6.42□□□□□ -1.38
TRA2B-201ENST00000259043 SHTN1A0MZ66 631 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 UNC119BA6NIH7 251 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 HTRA2O43464 458 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-201ENST00000259043 B3GALT2O43825 422 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 SPDEFO95238 335 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 DDX6P26196 483 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRA2B-201ENST00000259043 RESTQ13127 1097 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 TP53BP2Q13625 1128 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 ACAP2Q15057 778 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 UBE3BQ7Z3V4 1068 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 MAPKAPK5Q8IW41 473 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 RHOT1Q8IXI2 618 aa6.41□□□□□ -1.38
TRA2B-201ENST00000259043 TMEM132CQ8N3T6 1108 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms