RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 SHC4Q6S5L8 630 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CEP68Q76N32 757 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 DHX38Q92620 1227 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 NFKBIZQ9BYH8 718 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 HDAC6Q9UBN7 1215 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TLK1Q9UKI8 766 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CCDC78A2IDD5 438 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TBC1D12O60347 775 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 FTLP02792 175 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ASGR1P07306 291 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 NPTX2P47972 431 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 RHBDL3P58872 404 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 GPC5P78333 572 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CUL4AQ13619 759 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ARMC6Q6NXE6 501 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ILDR2Q71H61 639 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 ADCK2Q7Z695 626 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CTU1Q7Z7A3 348 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 POLR3CQ9BUI4 534 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 TRPV6Q9H1D0 765 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 DDX43Q9NXZ2 648 aaKnown RBP6.73□□□□□ -1.33
BRIP1-201ENST00000259008 DSEQ9UL01 958 aa6.73□□□□□ -1.33
BRIP1-201ENST00000259008 CCDC66A2RUB6 948 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PDXKO00764 312 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 CYP11B2P19099 503 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 GTF2H1P32780 548 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF131P52739 623 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 BBS9Q3SYG4 887 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 Q4G0T1 1027 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 GET4Q7L5D6 327 aaPredicted RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ZC3H18Q86VM9 953 aaKnown RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 CFAP61Q8NHU2 1237 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 C18orf8Q96DM3 657 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 CHST12Q9NRB3 414 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PARVAQ9NVD7 372 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 RNF186Q9NXI6 227 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PPME1Q9Y570 386 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 GAKO14976 1311 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PCDH8O95206 1070 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 GJB1P08034 283 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 CTNNA1P35221 906 aaKnown RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ZNF177Q13360 481 aaPredicted RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 CCL14Q16627 93 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 EPC2Q52LR7 807 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 OVOS1Q6IE37 1185 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ANGPTL8Q6UXH0 198 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SLC25A41Q8N5S1 370 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 BBOF1Q8ND07 529 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 TSC1Q92574 1164 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 MCEEQ96PE7 176 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PNMA5Q96PV4 448 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 POP1Q99575 1024 aaKnown RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 RABEP2Q9H5N1 569 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 TLE6Q9H808 572 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 NRCAMQ92823 1304 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SLIT2O94813 1529 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 APOL1O14791 398 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SCAMP3O14828 347 aaKnown RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SNX2O60749 519 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 NDUFS2O75306 463 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 CXCL14O95715 111 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 KRT3P12035 628 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 GTF2F1P35269 517 aaKnown RBP eCLIP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SCNN1GP51170 649 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 RWDD2BP57060 319 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 TROAPQ12815 778 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SDCCAG8Q86SQ7 713 aaPredicted RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SAMD3Q8N6K7 520 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 KLC2Q9H0B6 622 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PLA2G4CQ9UP65 541 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 COL3A1P02461 1466 aaPredicted RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 SLC12A8A0AV02 714 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 EFCAB8A8MWE9 144 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 F5H5T6 163 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PODXLO00592 558 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PDGFRAP16234 1089 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 PPP2R5EQ16537 467 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 GKAP1Q5VSY0 366 aaPredicted RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 RD3Q7Z3Z2 195 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 AMIGO3Q86WK7 504 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ATP6V0D2Q8N8Y2 350 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 RAPGEF5Q92565 580 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 EGFL8Q99944 293 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 IL25Q9H293 177 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 METTL5Q9NRN9 209 aaKnown RBP6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ZKSCAN5Q9Y2L8 839 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 MRC1P22897 1456 aa6.72□□□□□ -1.33
BRIP1-201ENST00000259008 ASS1P00966 412 aaKnown RBP6.71□□□□□ -1.33
BRIP1-201ENST00000259008 MAPK9P45984 424 aa6.71□□□□□ -1.33
BRIP1-201ENST00000259008 VEGFBP49765 207 aa6.71□□□□□ -1.33
BRIP1-201ENST00000259008 IRX4P78413 519 aa6.71□□□□□ -1.33
BRIP1-201ENST00000259008 ELAVL2Q12926 359 aaKnown RBP6.71□□□□□ -1.33
BRIP1-201ENST00000259008 STARD3Q14849 445 aa6.71□□□□□ -1.33
BRIP1-201ENST00000259008 MTHFD1LQ6UB35 978 aa6.71□□□□□ -1.33
BRIP1-201ENST00000259008 C15orf52Q6ZUT6 534 aaKnown RBP6.71□□□□□ -1.33
BRIP1-201ENST00000259008 PCGF5Q86SE9 256 aa6.71□□□□□ -1.33
BRIP1-201ENST00000259008 SLC51AQ86UW1 340 aa6.71□□□□□ -1.33
BRIP1-201ENST00000259008 RASAL3Q86YV0 1011 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms