RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 FBXO32Q969P5 355 aa14.19□□□□□ -0.14
PRPF38A-201ENST00000257181 DYNC1I1O14576 645 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 C10orf120Q5SQS8 335 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 CD99L2Q8TCZ2 262 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 REEP2Q9BRK0 252 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 DERAQ9Y315 318 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 TPD52P55327 224 aaPredicted RBP14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 IRX4P78413 519 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 YWHAHQ04917 246 aaPredicted RBP14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 CDH18Q13634 790 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 SEPT6Q14141 434 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 KAZNQ674X7 775 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 SPON2Q9BUD6 331 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 CPVLQ9H3G5 476 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 PCDHB2Q9Y5E7 798 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 FAM76AQ8TAV0 307 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 FRMD8Q9BZ67 464 aaPredicted RBP14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 A1CFQ9NQ94 594 aaKnown RBP14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 CYP39A1Q9NYL5 469 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 PRG3Q9Y2Y8 225 aaPredicted RBP14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 B3GAT3O94766 335 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 IRF5Q13568 498 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 ATPAF2Q8N5M1 289 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 VCXQ9H320 206 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 FBXO28Q9NVF7 368 aa14.18□□□□□ -0.14
PRPF38A-201ENST00000257181 BTBD19C9JJ37 291 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 ACKR2O00590 384 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 CYB561D2O14569 222 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 OPLAHO14841 1288 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 SSTR3P32745 418 aaPredicted RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 RAPH1Q70E73 1250 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 KLHL7Q8IXQ5 586 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 ADGRF2Q8IZF7 708 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 VGLL2Q8N8G2 317 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 DTNBP1Q96EV8 351 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 UBXN6Q9BZV1 441 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 TRIM9Q9C026 710 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 UBE2OQ9C0C9 1292 aaKnown RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 BFARQ9NZS9 450 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 USP2O75604 605 aaPredicted RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 LAMTOR4Q0VGL1 99 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 CPLX4Q7Z7G2 160 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 CALML6Q8TD86 181 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 MAGOHBQ96A72 148 aaKnown RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 CELF4Q9BZC1 486 aaKnown RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 OR6C75A6NL08 312 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 MYO1DO94832 1006 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 USP41Q3LFD5 358 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 RCOR2Q8IZ40 523 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 LRRC71Q8N4P6 559 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 PPHLN1Q8NEY8 458 aaKnown RBP14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 SLC4A9Q96Q91 983 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 HIPK3Q9H422 1215 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 RGL1Q9NZL6 768 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 APEX2Q9UBZ4 518 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 IQANK1A0A1B0GTG1 560 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 GPR25O00155 361 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 CAPN15O75808 1086 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 PTK7Q13308 1070 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 PBXIP1Q96AQ6 731 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 HDAC11Q96DB2 347 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 SAAL1Q96ER3 474 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 HINFPQ9BQA5 517 aa14.17□□□□□ -0.14
PRPF38A-201ENST00000257181 CLUHO75153 1309 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 IGF2BP3O00425 579 aaKnown RBP eCLIP14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 RASSF2P50749 326 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 ARL4CP56559 192 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 DEUP1Q05D60 604 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 PDK1Q15118 436 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 OXER1Q8TDS5 423 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 BNIP3LO60238 219 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 GRIK3Q13003 919 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 KCNB2Q92953 911 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 BAG5Q9UL15 447 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 SNX2O60749 519 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 LSM8O95777 96 aaKnown RBP14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 COL6A1P12109 1028 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 CDC25CP30307 473 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 SH3D19Q5HYK7 790 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 AARS2Q5JTZ9 985 aaKnown RBP14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 RNF187Q5TA31 235 aaPredicted RBP14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 TTC8Q8TAM2 541 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 TSPAN17Q96FV3 270 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 PPP1R16AQ96I34 528 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 RNPC3Q96LT9 517 aaKnown RBP14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 MRGBPQ9NV56 204 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 SRRDQ9UH36 339 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 PLA2G4CQ9UP65 541 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 FNDC3AQ9Y2H6 1198 aaKnown RBP14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 TTLL13PA6NNM8 815 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 RNF40O75150 1001 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 BCAR1P56945 870 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 FPGSQ05932 587 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 UGP2Q16851 508 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 SYTL3Q4VX76 610 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 VSIG10LQ86VR7 867 aa14.16□□□□□ -0.14
PRPF38A-201ENST00000257181 CHSY1Q86X52 802 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms