RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 WEE2P0C1S8 567 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 RFX1P22670 979 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 DSG3P32926 999 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 ALDH5A1P51649 535 aaPredicted RBP14.34□□□□□ -0.11
VHL-201ENST00000256474 C1orf131Q8NDD1 294 aaKnown RBP14.34□□□□□ -0.11
VHL-201ENST00000256474 ATL2Q8NHH9 583 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 MCEEQ96PE7 176 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 PDCD2LQ9BRP1 358 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 TMEM121Q9BTD3 319 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 DCLK3Q9C098 648 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 TBC1D22BQ9NU19 505 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 PCDHA10Q9Y5I2 948 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 UBE4BO95155 1302 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 OVGP1Q12889 678 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 WDR78Q5VTH9 848 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 SLC39A4Q6P5W5 647 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 LRRN4Q8WUT4 740 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 MSTO1Q9BUK6 570 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 SYNCQ9H7C4 482 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.11
VHL-201ENST00000256474 DNPEPQ9ULA0 475 aa14.33□□□□□ -0.11
VHL-201ENST00000256474 NR3C2P08235 984 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 TARSP26639 723 aaKnown RBP14.33□□□□□ -0.12
VHL-201ENST00000256474 NRLP54845 237 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 CLUL1Q15846 466 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 K7ERI5 159 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 CYP1A2P05177 515 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 BRD2P25440 801 aaKnown RBP14.33□□□□□ -0.12
VHL-201ENST00000256474 TFAMQ00059 246 aaKnown RBP14.33□□□□□ -0.12
VHL-201ENST00000256474 PRKCEQ02156 737 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 SIX1Q15475 284 aaPredicted RBP14.33□□□□□ -0.12
VHL-201ENST00000256474 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 SAMD7Q7Z3H4 446 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 ZNF516Q92618 1163 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 KDM4CQ9H3R0 1056 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 AGO2Q9UKV8 859 aaKnown RBP14.33□□□□□ -0.12
VHL-201ENST00000256474 ZNF536O15090 1300 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 MROH7Q68CQ1 1323 aa14.33□□□□□ -0.12
VHL-201ENST00000256474 F8VP50 259 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 ITIH2P19823 946 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 MAGEA4P43358 317 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 HHATQ5VTY9 493 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 VSTM1Q6UX27 236 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 ANKS1BQ7Z6G8 1248 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 AGAP11Q8TF27 550 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 NSMCE1Q8WV22 266 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 KRT16P08779 473 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 ATP5DP30049 168 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 HMGCS2P54868 508 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 TRMT10CQ7L0Y3 403 aaKnown RBP14.32□□□□□ -0.12
VHL-201ENST00000256474 CCDC60Q8IWA6 550 aaPredicted RBP14.32□□□□□ -0.12
VHL-201ENST00000256474 RBBP8NLQ8NC74 664 aaPredicted RBP14.32□□□□□ -0.12
VHL-201ENST00000256474 GRK7Q8WTQ7 553 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 IMPG2Q9BZV3 1241 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 C5orf60A6NFR6 353 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 GGPS1O95749 300 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 PAEPP09466 180 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 DRG2P55039 364 aaKnown RBP14.32□□□□□ -0.12
VHL-201ENST00000256474 PDIA2Q13087 525 aaKnown RBP14.32□□□□□ -0.12
VHL-201ENST00000256474 TXNRD3NBQ6F5E7 133 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 MFSD7Q6UXD7 560 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 RFX8Q6ZV50 586 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 THNSL1Q8IYQ7 743 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 FITM2Q8N6M3 262 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 OR5B17Q8NGF7 314 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 PSPC1Q8WXF1 523 aaKnown RBP14.32□□□□□ -0.12
VHL-201ENST00000256474 CD101Q93033 1021 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 TRAIPQ9BWF2 469 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.32□□□□□ -0.12
VHL-201ENST00000256474 NEU2Q9Y3R4 380 aa14.32□□□□□ -0.12
VHL-201ENST00000256474 CSDE1O75534 798 aaKnown RBP14.31□□□□□ -0.12
VHL-201ENST00000256474 ELF1P32519 619 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 PKN2Q16513 984 aaKnown RBP14.31□□□□□ -0.12
VHL-201ENST00000256474 BBS9Q3SYG4 887 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 RHOT1Q8IXI2 618 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 NIM1KQ8IY84 436 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 NHSQ6T4R5 1651 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 F5H423 210 aaPredicted RBP14.31□□□□□ -0.12
VHL-201ENST00000256474 GTF2H1P32780 548 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 GAD2Q05329 585 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 ALCAMQ13740 583 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 TDRD10Q5VZ19 366 aaKnown RBP14.31□□□□□ -0.12
VHL-201ENST00000256474 PCNX4Q63HM2 1172 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 CCDC89Q8N998 374 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 CNOT7Q9UIV1 285 aaKnown RBP14.31□□□□□ -0.12
VHL-201ENST00000256474 HAO1Q9UJM8 370 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 PCDHB2Q9Y5E7 798 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 PTPRJQ12913 1337 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 WNT10BO00744 389 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 P4HA2O15460 535 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 ASAP2O43150 1006 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 GBP1P32455 592 aa14.31□□□□□ -0.12
VHL-201ENST00000256474 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
VHL-201ENST00000256474 MIS18BP1Q6P0N0 1132 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms