RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 PARK7Q99497 189 aaKnown RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 ADAM7Q9H2U9 754 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 NYAP2Q9P242 653 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 FBXL5Q9UKA1 691 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 DMTF1Q9Y222 760 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 A8MXQ7 604 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 DCTN3O75935 186 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 CYP21A2P08686 494 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 PHBP35232 272 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 YARSP54577 528 aaKnown RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 EXOSC10Q01780 885 aaKnown RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 WDR72Q3MJ13 1102 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 KIAA1755Q5JYT7 1200 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 RHOT2Q8IXI1 618 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 CYP4X1Q8N118 509 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 DDHD1Q8NEL9 900 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 PYROXD1Q8WU10 500 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 UBLCP1Q8WVY7 318 aaPredicted RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 SAR1AQ9NR31 198 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 IL17RBQ9NRM6 502 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 STK17AQ9UEE5 414 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 RWDD2AQ9UIY3 292 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.4
CCNA1-201ENST00000255465 DOCK3Q8IZD9 2030 aa12.52□□□□□ -0.4
CCNA1-201ENST00000255465 ZSWIM8A7E2V4 1837 aa12.52□□□□□ -0.4
CCNA1-201ENST00000255465 TTC26A0AVF1 554 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 NMT2O60551 498 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 FDPSP14324 419 aaKnown RBP12.52□□□□□ -0.41
CCNA1-201ENST00000255465 FOSL1P15407 271 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 OSBPP22059 807 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 HNRNPH3P31942 346 aaKnown RBP12.52□□□□□ -0.41
CCNA1-201ENST00000255465 MXI1P50539 228 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 DSG1Q02413 1049 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 COL19A1Q14993 1142 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 HSP90AA4PQ58FG1 418 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.41
CCNA1-201ENST00000255465 C4orf50Q6ZRC1 276 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 VPS36Q86VN1 386 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
CCNA1-201ENST00000255465 BIRC8Q96P09 236 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 PRPF18Q99633 342 aaKnown RBP12.52□□□□□ -0.41
CCNA1-201ENST00000255465 KLHL4Q9C0H6 718 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 NHEJ1Q9H9Q4 299 aaPredicted RBP12.52□□□□□ -0.41
CCNA1-201ENST00000255465 FKBP14Q9NWM8 211 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 PNMA2Q9UL42 364 aa12.52□□□□□ -0.41
CCNA1-201ENST00000255465 COL11A1P12107 1806 aaPredicted RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 LGALS16A8MUM7 142 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 CCDC188H7C350 402 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 ZNF862O60290 1169 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 FKTNO75072 461 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 LGR5O75473 907 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 BAIAP3O94812 1187 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TTLL1O95922 423 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 SHBGP04278 402 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 RPL17P18621 184 aaKnown RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 PTPN4P29074 926 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 CRABP2P29373 138 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 PDIA3P30101 505 aaKnown RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 PPARGP37231 505 aaPredicted RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 ACADSBP45954 432 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 RPL5P46777 297 aaKnown RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 PFKPQ01813 784 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TUBA3CQ13748 450 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 E2F2Q14209 437 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 CNGA2Q16280 664 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TNFAIP8L3Q5GJ75 292 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 NFRKBQ6P4R8 1299 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 C17orf99Q6UX52 265 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 MDM1Q8TC05 714 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 LPAR1Q92633 364 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 ESR2Q92731 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 EME1Q96AY2 570 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 SGF29Q96ES7 293 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 SELENOSQ9BQE4 189 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TBC1D10AQ9BXI6 508 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TXLNGYQ9BZA5 131 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 DENND2DQ9H6A0 471 aaPredicted RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 CRNNQ9UBG3 495 aaPredicted RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 GTF3C4Q9UKN8 822 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TMEM114B3SHH9 223 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 B4E1Z4 1266 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 RASA4BC9J798 803 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms