RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TRAIPQ9BWF2 469 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 CRISPLD2Q9H0B8 497 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 VRTNQ9H8Y1 702 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 LZTFL1Q9NQ48 299 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 ITGA11Q9UKX5 1188 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 PCDHB2Q9Y5E7 798 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 PCDHA13Q9Y5I0 950 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 RCCD1A6NED2 376 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 CYP26A1O43174 497 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 ITGB3P05106 788 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 HSPA8P11142 646 aaKnown RBP10.15□□□□□ -0.78
NIP7-202ENST00000254941 KCNE1P15382 129 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 ACO1P21399 889 aaKnown RBP10.15□□□□□ -0.78
NIP7-202ENST00000254941 AKAP5P24588 427 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 CD52P31358 61 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 ATICP31939 592 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 ETF1P62495 437 aaKnown RBP10.15□□□□□ -0.78
NIP7-202ENST00000254941 PAK2Q13177 524 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 ZNF699Q32M78 642 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 DNTTIP2Q5QJE6 756 aaKnown RBP10.15□□□□□ -0.78
NIP7-202ENST00000254941 C10orf76Q5T2E6 689 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 TRAF7Q6Q0C0 670 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 FAM126BQ8IXS8 530 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 SLC30A5Q8TAD4 765 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 OLIG1Q8TAK6 271 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 CAGE1Q8TC20 777 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 EPS8L1Q8TE68 723 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 ZNF333Q96JL9 665 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.15□□□□□ -0.78
NIP7-202ENST00000254941 NIF3L1Q9GZT8 377 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 CXCL16Q9H2A7 254 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 LUC7LQ9NQ29 371 aaKnown RBP10.15□□□□□ -0.78
NIP7-202ENST00000254941 FAM105AQ9NUU6 356 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 DPP3Q9NY33 737 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 NAGPAQ9UK23 515 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 CNTN6Q9UQ52 1028 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 UMODL1Q5DID0 1318 aa10.15□□□□□ -0.78
NIP7-202ENST00000254941 DDX3XO00571 662 aaKnown RBP eCLIP10.15□□□□□ -0.791e-7■□□□□ 9.2
NIP7-202ENST00000254941 KRT86O43790 486 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 STAU1O95793 577 aaKnown RBP10.15□□□□□ -0.79
NIP7-202ENST00000254941 ABL1P00519 1130 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 CD4P01730 458 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 KRT19P08727 400 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 ZSCAN20P17040 1043 aaPredicted RBP10.15□□□□□ -0.79
NIP7-202ENST00000254941 USP8P40818 1118 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 MAGEA1P43355 309 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 KIF5AQ12840 1032 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 DSC3Q14574 896 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 NAB2Q15742 525 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 PKN2Q16513 984 aaKnown RBP10.15□□□□□ -0.79
NIP7-202ENST00000254941 SLC47A2Q86VL8 602 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 TXLNBQ8N3L3 684 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 APOL6Q9BWW8 343 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 LACRTQ9GZZ8 138 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 NOCTQ9UK39 431 aaKnown RBP10.15□□□□□ -0.79
NIP7-202ENST00000254941 NENFQ9UMX5 172 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 TANC1Q9C0D5 1861 aa10.15□□□□□ -0.79
NIP7-202ENST00000254941 SMIM28A0A1B0GU29 152 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 PJA2O43164 708 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 ZNF623O75123 536 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 SGPL1O95470 568 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 KRT5P13647 590 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 CYP11B1P15538 503 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 POLR2BP30876 1174 aaKnown RBP10.14□□□□□ -0.79
NIP7-202ENST00000254941 ASPAP45381 313 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
NIP7-202ENST00000254941 RBP5P82980 135 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 MBTPS1Q14703 1052 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 ZNF667Q5HYK9 610 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 CCDC122Q5T0U0 273 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 ALKBH5Q6P6C2 394 aaKnown RBP10.14□□□□□ -0.79
NIP7-202ENST00000254941 GLYCTKQ8IVS8 523 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 HACE1Q8IYU2 909 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 UBR7Q8N806 425 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 LNX1Q8TBB1 728 aaPredicted RBP10.14□□□□□ -0.79
NIP7-202ENST00000254941 U2AF1L4Q8WU68 220 aaKnown RBP10.14□□□□□ -0.79
NIP7-202ENST00000254941 ARMC5Q96C12 935 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 AGPAT1Q99943 283 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 TSGA10Q9BZW7 698 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 TRIM10Q9UDY6 481 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 PARP2Q9UGN5 583 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 UBQLN1Q9UMX0 589 aaKnown RBP10.14□□□□□ -0.79
NIP7-202ENST00000254941 TFR2Q9UP52 801 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 SCN5AQ14524 2016 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
NIP7-202ENST00000254941 A0A0U1RQF3 1178 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 XPOTO43592 962 aaKnown RBP10.13□□□□□ -0.79
NIP7-202ENST00000254941 MGEA5O60502 916 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 CLSTN1O94985 981 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 RAB27AP51159 221 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 PDE6CP51160 858 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 GUCY2FP51841 1108 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 BPIFB4P59827 614 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 BFSP2Q13515 415 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 WDR72Q3MJ13 1102 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 GLRA4Q5JXX5 417 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 TMEM270Q6UE05 265 aa10.13□□□□□ -0.79
NIP7-202ENST00000254941 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.13□□□□□ -0.79
NIP7-202ENST00000254941 MRPL10Q7Z7H8 261 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms