RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GPAT2Q6NUI2 795 aa19.64■□□□□ 0.74
SMARCC1-201ENST00000254480 PLA2G12BQ9BX93 195 aa19.64■□□□□ 0.74
SMARCC1-201ENST00000254480 CYP2C9P11712 490 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 AP3M2P53677 418 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 TWF1Q12792 350 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 GOLGA7BQ2TAP0 167 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 TMED8Q6PL24 325 aaPredicted RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 TRIM54Q9BYV2 358 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 RUBCNLQ9H714 662 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 GPRC5CQ9NQ84 441 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 METTL5Q9NRN9 209 aaKnown RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 A0A1B0GTH6 734 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 ITGA4P13612 1032 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 DEUP1Q05D60 604 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 E4F1Q66K89 784 aaPredicted RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 DTX3LQ8TDB6 740 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 MXRA8Q9BRK3 442 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 MAD2L2Q9UI95 211 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 PFASO15067 1338 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 C3orf70A6NLC5 250 aaPredicted RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 RBM12Q9NTZ6 932 aaKnown RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 CNTNAP5Q8WYK1 1306 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 FDX1P10109 184 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 CCDC85BQ15834 202 aaPredicted RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 TADA2BQ86TJ2 420 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 IPMKQ8NFU5 416 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 LPAR1Q92633 364 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 MOV10L1Q9BXT6 1211 aaKnown RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 NYAP2Q9P242 653 aa19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 ZC3H7BQ9UGR2 993 aaKnown RBP19.64■□□□□ 0.73
SMARCC1-201ENST00000254480 QRICH2Q9H0J4 1663 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 ADGRA2Q96PE1 1338 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 SLC16A3O15427 465 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 CELF2O95319 508 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 FDPSP14324 419 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 SGSM1Q2NKQ1 1148 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 GNASQ5JWF2 1037 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 KCNV1Q6PIU1 500 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 RCOR2Q8IZ40 523 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 TMA16Q96EY4 203 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 SLC37A4O43826 429 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 HUNKP57058 714 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 DHX34Q14147 1143 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 RAD9BQ6WBX8 426 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 EHD2Q9NZN4 543 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 BCORL1Q5H9F3 1711 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 COMTP21964 271 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 TAP1Q03518 808 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 SBK1Q52WX2 424 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 ALDH8A1Q9H2A2 487 aaPredicted RBP19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 CTDNEP1O95476 244 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 CYBBP04839 570 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 USP10Q14694 798 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 LCMT1Q9UIC8 334 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 TRPM1Q7Z4N2 1603 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 ARHGEF40Q8TER5 1519 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 RHOBTB3O94955 611 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 BLVRAP53004 296 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 SYTL3Q4VX76 610 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 MFN1Q8IWA4 741 aa19.63■□□□□ 0.73
SMARCC1-201ENST00000254480 FAM95CA0A1B0GW59 222 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 RSPH10B2B2RC85 870 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 TRAPPC3O43617 180 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 RSPH10BP0C881 870 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 TCF7P36402 384 aaPredicted RBP19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 CASP4P49662 377 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 LATS2Q9NRM7 1088 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 NEU2Q9Y3R4 380 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 LMNAP02545 664 aaKnown RBP19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 ITGB3P05106 788 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 RPS6P62753 249 aaKnown RBP19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 LRRC74AQ0VAA2 488 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 SGO1Q5FBB7 561 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 FAXCQ5TGI0 409 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 IFNEQ86WN2 208 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 TEKT2Q9UIF3 430 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 MYO1DO94832 1006 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 CSF1RP07333 972 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 PYGBP11216 843 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 TCN1P20061 433 aaPredicted RBP19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 PTPRN2Q92932 1015 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 SPATS2LQ9NUQ6 558 aaKnown RBP19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 HMOX2P30519 316 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 ACER1Q8TDN7 264 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 YIPF3Q9GZM5 350 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 CHN1P15882 459 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 PPP3CCP48454 512 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 RAD23BP54727 409 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 IER5Q5VY09 327 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 COG1Q8WTW3 980 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 CENPKQ9BS16 269 aa19.62■□□□□ 0.73
SMARCC1-201ENST00000254480 HSPA9P38646 679 aaKnown RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 SH3BGRP55822 239 aaPredicted RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 CCZ1BP86790 482 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 CCZ1P86791 482 aaPredicted RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 C6orf10Q5SRN2 563 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 ASAP3Q8TDY4 903 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 FAM151AQ8WW52 585 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms