RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TNIP2Q8NFZ5 429 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 GRAPLQ8TC17 118 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 STK32AQ8WU08 396 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 PPP1R14BQ96C90 147 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 NARFQ9UHQ1 456 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 AGLP35573 1532 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 LAMC1P11047 1609 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 CLRN2A0PK11 232 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 AP3B1O00203 1094 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 NEMP1O14524 444 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 TLR3O15455 904 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 SPAG6O75602 509 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 NUP93Q8N1F7 819 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 RSPH1Q8WYR4 309 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 CYLDQ9NQC7 956 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 DDX56Q9NY93 547 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 HEY1Q9Y5J3 304 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 OVOS2A0A0J9YW53 1432 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 DRAP1Q14919 205 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 SGSM1Q2NKQ1 1148 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 OVOS2Q6IE36 1432 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 MAGEB18Q96M61 343 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 ISCA1Q9BUE6 129 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZNF212Q9UDV6 495 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 CRB1P82279 1406 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 CCT3P49368 545 aaKnown RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 TNFAIP1Q13829 316 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 KRT72Q14CN4 511 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 CNGA2Q16280 664 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 AMNQ9BXJ7 453 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 ASNSD1Q9NWL6 643 aa13.8□□□□□ -0.2
PCDHGA3-201ENST00000253812 A8MXQ7 604 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 SNPHO15079 494 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 KCNA2P16389 499 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ACTR2P61160 394 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 TRIM71Q2Q1W2 868 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ASPRV1Q53RT3 343 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 RSRC2Q7L4I2 434 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 SLC10A4Q96EP9 437 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZNF556Q9HAH1 456 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 CD209Q9NNX6 404 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 IP6K2Q9UHH9 426 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 CFAP99D6REC4 459 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 STX5Q13190 355 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 MTA3Q9BTC8 594 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 TRIM39Q9HCM9 518 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 HMG20AQ9NP66 347 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 NEU2Q9Y3R4 380 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 STK36Q9NRP7 1315 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 MYO3AQ8NEV4 1616 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 LSM1O15116 133 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 STX7O15400 261 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 DDHD2O94830 711 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 MED26O95402 600 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 NR3C1P04150 777 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZNF200P98182 395 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ARMC3Q5W041 872 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 TMC4Q7Z404 712 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ANKMY2Q8IV38 441 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ASZ1Q8WWH4 475 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ANO3Q9BYT9 981 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 TMEM165Q9HC07 324 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ATXN10Q9UBB4 475 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 F8W8V4 182 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 SNRPAP09012 282 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 SRGNP10124 158 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ROR1Q01973 937 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 MAPRE1Q15691 268 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 CELF1Q92879 486 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 MAGED4Q96JG8 741 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 OLFM1Q99784 485 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 EPAS1Q99814 870 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 C11orf70Q9BRQ4 267 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 DCUN1D5Q9BTE7 237 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 FHDC1Q9C0D6 1143 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 MMADHCQ9H3L0 296 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 IPPQ9Y573 584 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 ZHX2Q9Y6X8 837 aa13.79□□□□□ -0.2
PCDHGA3-201ENST00000253812 NRKQ7Z2Y5 1582 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 FAM25AB3EWG3 89 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 FAM25CB3EWG5 89 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 FAM25GB3EWG6 89 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 CD58P19256 250 aa13.78□□□□□ -0.2
PCDHGA3-201ENST00000253812 PSMA4P25789 261 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms