RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.93■■□□□ 1.58
LSM4-201ENST00000252816 BACE2Q9Y5Z0 518 aa24.93■■□□□ 1.58
LSM4-201ENST00000252816 PPEF2O14830 753 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 XPOTO43592 962 aaKnown RBP24.92■■□□□ 1.58
LSM4-201ENST00000252816 PAPLNO95428 1278 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 SLFN14P0C7P3 912 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 POU5F1Q01860 360 aaKnown RBP24.92■■□□□ 1.58
LSM4-201ENST00000252816 TMEM132DQ14C87 1099 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 FAM26FQ5R3K3 315 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 EPM2AIP1Q7L775 607 aaPredicted RBP24.92■■□□□ 1.58
LSM4-201ENST00000252816 SAAL1Q96ER3 474 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 FAM213AQ9BRX8 229 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 C1QTNF1Q9BXJ1 281 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 SCAND2PQ9GZW5 306 aaPredicted RBP24.92■■□□□ 1.58
LSM4-201ENST00000252816 ASB7Q9H672 318 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 TMEM206Q9H813 350 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 DERAQ9Y315 318 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 CDY1Q9Y6F8 540 aa24.92■■□□□ 1.58
LSM4-201ENST00000252816 C2orf16Q68DN1 1984 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 TCHHQ07283 1943 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 MTCL1Q9Y4B5 1905 aaKnown RBP24.91■■□□□ 1.58
LSM4-201ENST00000252816 C2CD4DB7Z1M9 353 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 TBC1D4O60343 1298 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 ALADP13716 330 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 GARTP22102 1010 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 AARSP49588 968 aaKnown RBP eCLIP24.91■■□□□ 1.58
LSM4-201ENST00000252816 WNT7BP56706 349 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 MRPL58Q14197 206 aaKnown RBP24.91■■□□□ 1.58
LSM4-201ENST00000252816 CEP57L1Q8IYX8 460 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 BEST2Q8NFU1 509 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 PAGE5Q96GU1 130 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 RHOBTB2Q9BYZ6 727 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 GDPD2Q9HCC8 539 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 NR2E1Q9Y466 385 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 ANK1P16157 1881 aa24.91■■□□□ 1.58
LSM4-201ENST00000252816 FAM86C2PA6NEL3 165 aa24.9■■□□□ 1.58
LSM4-201ENST00000252816 ZMYND10O75800 440 aa24.9■■□□□ 1.58
LSM4-201ENST00000252816 STXBP4Q6ZWJ1 553 aa24.9■■□□□ 1.58
LSM4-201ENST00000252816 EFCAB13Q8IY85 973 aa24.9■■□□□ 1.58
LSM4-201ENST00000252816 SMG7Q92540 1137 aaKnown RBP24.9■■□□□ 1.58
LSM4-201ENST00000252816 PCIF1Q9H4Z3 704 aa24.9■■□□□ 1.58
LSM4-201ENST00000252816 ZDHHC7Q9NXF8 308 aa24.9■■□□□ 1.58
LSM4-201ENST00000252816 C2CD2Q9Y426 696 aa24.9■■□□□ 1.58
LSM4-201ENST00000252816 FAM237AA0A1B0GTK4 181 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 PVALEFA0A1B0GWK0 134 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 GOLGA8IPA6NC78 632 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 GOLGA8JA6NMD2 632 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 M0QZQ0 153 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 EIF3DO15371 548 aaKnown RBP eCLIP24.89■■□□□ 1.58
LSM4-201ENST00000252816 C9orf57Q5W0N0 161 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 SLC8B1Q6J4K2 584 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 ZNF507Q8TCN5 953 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 PRKD2Q9BZL6 878 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 PCDHB8Q9UN66 801 aa24.89■■□□□ 1.58
LSM4-201ENST00000252816 DENND4AQ7Z401 1863 aa24.89■■□□□ 1.57
LSM4-201ENST00000252816 IL18RAPO95256 599 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 NDUFA8P51970 172 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 ARMCX5Q6P1M9 558 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 CYP26C1Q6V0L0 522 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 CCDC149Q6ZUS6 474 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 BRSK2Q8IWQ3 736 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 SCFD1Q8WVM8 642 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 FBXL5Q9UKA1 691 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 USTQ9Y2C2 406 aa24.88■■□□□ 1.57
LSM4-201ENST00000252816 ANO9A1A5B4 782 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 PIRO00625 290 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 SPTLC1O15269 473 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 KLRC4O43908 158 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 EXTL3O43909 919 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 C8AP07357 584 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 LILRA4P59901 499 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 ROR1Q01973 937 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 LIN9Q5TKA1 542 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 APPL2Q8NEU8 664 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 WDR6Q9NNW5 1121 aaKnown RBP24.87■■□□□ 1.57
LSM4-201ENST00000252816 SLC39A2Q9NP94 309 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 DPP3Q9NY33 737 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 USP25Q9UHP3 1055 aa24.87■■□□□ 1.57
LSM4-201ENST00000252816 TIMM13Q9Y5L4 95 aaPredicted RBP24.87■■□□□ 1.57
LSM4-201ENST00000252816 A0A1W2PQ27 194 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 A0A1W2PQ64 194 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 A0A1W2PQD8 194 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 WDR27A2RRH5 827 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 H7C4K7 107 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 TGFB1I1O43294 461 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 GPR37L1O60883 481 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 LDHAP00338 332 aaKnown RBP24.86■■□□□ 1.57
LSM4-201ENST00000252816 SYKP43405 635 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 NUCB2P80303 420 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 CTXN3Q4LDR2 81 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 TMEM31Q5JXX7 168 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 NELFCDQ8IXH7 590 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 FSIP1Q8NA03 581 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 TDRD5Q8NAT2 981 aaKnown RBP24.86■■□□□ 1.57
LSM4-201ENST00000252816 SLC7A14Q8TBB6 771 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 NOC3LQ8WTT2 800 aaKnown RBP24.86■■□□□ 1.57
LSM4-201ENST00000252816 LRFN3Q9BTN0 628 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 GOLPH3LQ9H4A5 285 aa24.86■■□□□ 1.57
LSM4-201ENST00000252816 RBAKQ9NYW8 714 aaPredicted RBP24.86■■□□□ 1.57
LSM4-201ENST00000252816 N4BP1O75113 896 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms