RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RBAKQ9NYW8 714 aaPredicted RBP13.86□□□□□ -0.19
VPREB3-201ENST00000248948 CGNQ9P2M7 1197 aaKnown RBP13.86□□□□□ -0.19
VPREB3-201ENST00000248948 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 TGM5O43548 720 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 KLRC4O43908 158 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 TKTP29401 623 aaKnown RBP13.85□□□□□ -0.19
VPREB3-201ENST00000248948 CASP1P29466 404 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 BRCC3P46736 316 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 SPAG1Q07617 926 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 PSMD2Q13200 908 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 KRBA2Q6ZNG9 492 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 HS2ST1Q7LGA3 356 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 GRAMD1CQ8IYS0 662 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 GPD1LQ8N335 351 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 SCFD1Q8WVM8 642 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 SAAL1Q96ER3 474 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 CLSTN3Q9BQT9 956 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 FAM213AQ9BRX8 229 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 GOLPH3LQ9H4A5 285 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 AGPAT3Q9NRZ7 376 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 ZDHHC7Q9NXF8 308 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 FBXW11Q9UKB1 542 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 PCDHB8Q9UN66 801 aa13.85□□□□□ -0.19
VPREB3-201ENST00000248948 ARHGEF37A1IGU5 675 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 LOC730098B7Z3J9 87 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 M0QZQ0 153 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 RPL17P18621 184 aaKnown RBP13.84□□□□□ -0.19
VPREB3-201ENST00000248948 SSTR3P32745 418 aaPredicted RBP13.84□□□□□ -0.19
VPREB3-201ENST00000248948 HOXD13P35453 343 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
VPREB3-201ENST00000248948 RAB33AQ14088 237 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 VARS2Q5ST30 1063 aaKnown RBP13.84□□□□□ -0.19
VPREB3-201ENST00000248948 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
VPREB3-201ENST00000248948 SLC8B1Q6J4K2 584 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 LILRA6Q6PI73 481 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 GPR149Q86SP6 731 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 C12orf56Q8IXR9 622 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 EFCAB13Q8IY85 973 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 APPL2Q8NEU8 664 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 CCDC47Q96A33 483 aaKnown RBP13.84□□□□□ -0.19
VPREB3-201ENST00000248948 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 OXCT2Q9BYC2 517 aaPredicted RBP13.84□□□□□ -0.19
VPREB3-201ENST00000248948 DOCK8Q8NF50 2099 aa13.84□□□□□ -0.19
VPREB3-201ENST00000248948 ANO9A1A5B4 782 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 GOLGA6L4A6NEF3 574 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 H7C4K7 107 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 I3L4J1 428 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 RPN1P04843 607 aaKnown RBP13.83□□□□□ -0.2
VPREB3-201ENST00000248948 POU2F2P09086 479 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 IGFBP6P24592 240 aaPredicted RBP13.83□□□□□ -0.2
VPREB3-201ENST00000248948 HOXA9P31269 272 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 DPYDQ12882 1025 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 MRPL58Q14197 206 aaKnown RBP13.83□□□□□ -0.2
VPREB3-201ENST00000248948 SURF1Q15526 300 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 KMT5BQ4FZB7 885 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 LIN9Q5TKA1 542 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 C9orf57Q5W0N0 161 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 ZNF280DQ6N043 979 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 KANK3Q6NY19 840 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 RTL10Q7L3V2 364 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 KIAA0895Q8NCT3 520 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 TMEM174Q8WUU8 243 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 ZNF560Q96MR9 790 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 POMKQ9H5K3 350 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 SLC39A2Q9NP94 309 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 HSPBP1Q9NZL4 362 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 CDY1Q9Y6F8 540 aa13.83□□□□□ -0.2
VPREB3-201ENST00000248948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
VPREB3-201ENST00000248948 PIRO00625 290 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 TGFB1I1O43294 461 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 ZMYND10O75800 440 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 ZNF202O95125 648 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 KIF20AO95235 890 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 ODC1P11926 461 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 TYMPP19971 482 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 PNPLA4P41247 253 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 YWHAHQ04917 246 aaPredicted RBP13.82□□□□□ -0.2
VPREB3-201ENST00000248948 KCNB1Q14721 858 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 KNOP1Q1ED39 458 aaKnown RBP13.82□□□□□ -0.2
VPREB3-201ENST00000248948 TMC5Q6UXY8 1006 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 PALB2Q86YC2 1186 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 GLYCTKQ8IVS8 523 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 FMR1NBQ8N0W7 255 aaPredicted RBP13.82□□□□□ -0.2
VPREB3-201ENST00000248948 C12orf76Q8N812 135 aaPredicted RBP13.82□□□□□ -0.2
VPREB3-201ENST00000248948 KREMEN2Q8NCW0 462 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 APOL5Q9BWW9 433 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 CD320Q9NPF0 282 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 ITGA11Q9UKX5 1188 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 USTQ9Y2C2 406 aa13.82□□□□□ -0.2
VPREB3-201ENST00000248948 GOLGA8IPA6NC78 632 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 ZNF233A6NK53 670 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 GOLGA8JA6NMD2 632 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 ADAM12O43184 909 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 TBC1D4O60343 1298 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms