RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 WNT8BQ93098 351 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 PDZD7Q9H5P4 517 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 ABCB6Q9NP58 842 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 PTCH2Q9Y6C5 1203 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 ZEB2O60315 1214 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 TSPAN1O60635 241 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 RTN2O75298 545 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 GZMAP12544 262 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 WDR44Q5JSH3 913 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 CCDC181Q5TID7 509 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 GDF6Q6KF10 455 aaPredicted RBP25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 WDR93Q6P2C0 686 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 SPC25Q9HBM1 224 aa25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 DDX20Q9UHI6 824 aaKnown RBP25.05■■□□□ 1.6
SYNGR3-201ENST00000248121 KRT5P13647 590 aa25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 ACO1P21399 889 aaKnown RBP25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 PDE6CP51160 858 aa25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 DAAM2Q86T65 1068 aa25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 PXYLP1Q8TE99 480 aa25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 HNRNPLLQ8WVV9 542 aaKnown RBP25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 SAGE1Q9NXZ1 904 aa25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 RNF14Q9UBS8 474 aa25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 TNFSF13BQ9Y275 285 aa25.04■■□□□ 1.6
SYNGR3-201ENST00000248121 GRIN2DO15399 1336 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 UMODL1Q5DID0 1318 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 MEFVO15553 781 aaPredicted RBP25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 PAFAH1B1P43034 410 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 CFAP221Q4G0U5 840 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 ZNF410Q86VK4 478 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 TMEM130Q8N3G9 435 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 FAM81BQ96LP2 452 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 ARFGAP3Q9NP61 516 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 NUB1Q9Y5A7 615 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 SASH3O75995 380 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 PEX26Q7Z412 305 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 WDR49Q8IV35 697 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 RBM12Q9NTZ6 932 aaKnown RBP25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 GTF2IRD1Q9UHL9 959 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 TRIP11Q15643 1979 aa25.03■■□□□ 1.6
SYNGR3-201ENST00000248121 KCNK3O14649 394 aa25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 CST3P01034 146 aaPredicted RBP25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 CUL2Q13617 745 aa25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 NCOA4Q13772 614 aa25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 TCEAL1Q15170 157 aa25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 BEND6Q5SZJ8 279 aaPredicted RBP25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 SYCE1Q8N0S2 351 aa25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 TRIM17Q9Y577 477 aa25.02■■□□□ 1.6
SYNGR3-201ENST00000248121 TARSL2A2RTX5 802 aaKnown RBP25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 CES2O00748 559 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 CLTAP09496 248 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 HADHBP55084 474 aaKnown RBP25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 NOP14P78316 857 aaKnown RBP25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 LONRF2Q1L5Z9 754 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 FAM47CQ5HY64 1035 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 HES6Q96HZ4 224 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 MTMR12Q9C0I1 747 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 OGFRQ9NZT2 677 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 KPNA6O60684 536 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 GNRH1P01148 92 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 GPC5P78333 572 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 SH3TC2Q8TF17 1288 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 FAM212AQ96EL1 285 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 LRRC1Q9BTT6 524 aa25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 CHORDC1Q9UHD1 332 aaPredicted RBP25.01■■□□□ 1.59
SYNGR3-201ENST00000248121 CST5P28325 142 aaPredicted RBP25■■□□□ 1.59
SYNGR3-201ENST00000248121 RHOT2Q8IXI1 618 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 HDAC7Q8WUI4 952 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 TAF4BQ92750 862 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 FUT8Q9BYC5 575 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 CITO14578 2027 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 ATMINO43313 823 aaPredicted RBP25■■□□□ 1.59
SYNGR3-201ENST00000248121 ERLIN2O94905 339 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 TUBBP07437 444 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 CXCL8P10145 99 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 AP3M2P53677 418 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 RNASE9P60153 205 aaKnown RBP25■■□□□ 1.59
SYNGR3-201ENST00000248121 EFCAB13Q8IY85 973 aa25■■□□□ 1.59
SYNGR3-201ENST00000248121 PHACTR2O75167 634 aa24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 ZMYND10O75800 440 aa24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 ASS1P00966 412 aaKnown RBP24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 DARSP14868 501 aaKnown RBP24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 GRK4P32298 578 aa24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 MRPS25P82663 173 aaKnown RBP24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 LHX8Q68G74 356 aa24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 PBKQ96KB5 322 aa24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 PCDHB2Q9Y5E7 798 aa24.99■■□□□ 1.59
SYNGR3-201ENST00000248121 HOXA11P31270 313 aaPredicted RBP24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 SNX17Q15036 470 aa24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 SLAIN1Q8ND83 568 aa24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 GCOM2Q9BZD3 368 aaPredicted RBP24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 CTTNBP2NLQ9P2B4 639 aa24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 CNTN6Q9UQ52 1028 aa24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 CLEC16AQ2KHT3 1053 aa24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 DMGDHQ9UI17 866 aaKnown RBP24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 AMFRQ9UKV5 643 aa24.98■■□□□ 1.59
SYNGR3-201ENST00000248121 DDX3YO15523 660 aaKnown RBP24.97■■□□□ 1.59
SYNGR3-201ENST00000248121 ATP8B1O43520 1251 aa24.97■■□□□ 1.59
SYNGR3-201ENST00000248121 MYCP01106 439 aaPredicted RBP24.97■■□□□ 1.59
SYNGR3-201ENST00000248121 UNGP13051 313 aaPredicted RBP24.97■■□□□ 1.59
SYNGR3-201ENST00000248121 MYL6P60660 151 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms