RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MRPS25P82663 173 aaKnown RBP18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 PAK2Q13177 524 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 BFSP2Q13515 415 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 TCERG1LQ5VWI1 586 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 SLFN12LQ6IEE8 588 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 CRELD2Q6UXH1 353 aaPredicted RBP18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 IRF2BP2Q7Z5L9 587 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 SLC9A9Q8IVB4 645 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 GPD1LQ8N335 351 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 EXOC4Q96A65 974 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 FAM212AQ96EL1 285 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 POP1Q99575 1024 aaKnown RBP18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 SEZ6LQ9BYH1 1024 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 PLCB1Q9NQ66 1216 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 RNF19AQ9NV58 838 aa18.24■□□□□ 0.51
CDKN1A-201ENST00000244741 PALMO75781 387 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 TRIM49P0CI25 452 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 TRIM49CP0CI26 452 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 UCHL3P15374 230 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 MCL1Q07820 350 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 NFIL3Q16649 462 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 EXOC3L4Q17RC7 722 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 FAM26DQ5JW98 314 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 TWF2Q6IBS0 349 aaKnown RBP18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 C12orf56Q8IXR9 622 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 TOX2Q96NM4 488 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 APOL6Q9BWW8 343 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 DMGDHQ9UI17 866 aaKnown RBP18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 HPCAL4Q9UM19 191 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 FAM189A1O60320 539 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 NBNO60934 754 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 SNRPFP62306 86 aaKnown RBP18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 GPNMBQ14956 572 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 CCDC181Q5TID7 509 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 C1orf53Q5VUE5 145 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 NOTUMQ6P988 496 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 PLEKHO2Q8TD55 490 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 MS4A14Q96JA4 679 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 WNT8AQ9H1J5 351 aa18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 LUC7LQ9NQ29 371 aaKnown RBP18.23■□□□□ 0.51
CDKN1A-201ENST00000244741 TET1Q8NFU7 2136 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 EXTL3O43909 919 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 MGEA5O60502 916 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 PHACTR2O75167 634 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 RPLP2P05387 115 aaKnown RBP18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 CLTBP09497 229 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 ITGB8P26012 769 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 PTK2Q05397 1052 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 HSP90B2PQ58FF3 399 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 LMBRD2Q68DH5 695 aaPredicted RBP18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 CCDC70Q6NSX1 233 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 ZNF571Q7Z3V5 609 aaPredicted RBP18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 DEFB128Q7Z7B8 93 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 UBE2Q1Q7Z7E8 422 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 ACBD3Q9H3P7 528 aa18.22■□□□□ 0.51
CDKN1A-201ENST00000244741 CCDC85CA6NKD9 419 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 GPR182O15218 404 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 FTCDO95954 541 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 DLATP10515 647 aaKnown RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 AARSP49588 968 aaKnown RBP eCLIP18.21■□□□□ 0.513e-8■■■■■ 82.4
CDKN1A-201ENST00000244741 SLC27A1Q6PCB7 646 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 FAM71BQ8TC56 605 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 SLC35C1Q96A29 364 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 BORCS6Q96GS4 357 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 ABHD8Q96I13 439 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 ADPGKQ9BRR6 497 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 TRIM6Q9C030 488 aaPredicted RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 METTL14Q9HCE5 456 aaKnown RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 ERVK-5Q9HDB9 667 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 TOPORSQ9NS56 1045 aaPredicted RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 PSD3Q9NYI0 1048 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 SCN5AQ14524 2016 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 CCDC66A2RUB6 948 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 TRIM43BA6NCK2 446 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 OGTO15294 1046 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 SLC16A3O15427 465 aaKnown RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 PAFAH1B1P43034 410 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 SLC7A5Q01650 507 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 TRIM43Q96BQ3 446 aaPredicted RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 SPAG5Q96R06 1193 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 SELENOOQ9BVL4 669 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 CXCL16Q9H2A7 254 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 SIX2Q9NPC8 291 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 RBAKQ9NYW8 714 aaPredicted RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 AJAP1Q9UKB5 411 aaPredicted RBP18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 TBX21Q9UL17 535 aa18.21■□□□□ 0.51
CDKN1A-201ENST00000244741 RANBP2P49792 3224 aaKnown RBP18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 ZNF233A6NK53 670 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 CAND2O75155 1236 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 SYF2O95926 243 aaKnown RBP18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 STAG3L1P0CL83 205 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 CXCL8P10145 99 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 AKAP5P24588 427 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 LMAN1P49257 510 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 UBXN11Q5T124 520 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 TMEM130Q8N3G9 435 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 AENQ8WTP8 325 aaKnown RBP18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 FBXL18Q96ME1 805 aa18.2■□□□□ 0.5
CDKN1A-201ENST00000244741 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms