RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 THAP12O43422 761 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 HSPA6P17066 643 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 ZNF157P51786 506 aaPredicted RBP24.85■■□□□ 1.57
MSX2-201ENST00000239243 CDC42EP1Q00587 391 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 PAK2Q13177 524 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 LIN9Q5TKA1 542 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 CCDC26Q8TAB7 109 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.85■■□□□ 1.57
MSX2-201ENST00000239243 SCLT1Q96NL6 688 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 AP1M1Q9BXS5 423 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 EPB41L5Q9HCM4 733 aa24.85■■□□□ 1.57
MSX2-201ENST00000239243 RAD51CO43502 376 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 SPOPO43791 374 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 GLI1P08151 1106 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 CXCL8P10145 99 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 ANK1P16157 1881 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 MRPS25P82663 173 aaKnown RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 GUCY2DQ02846 1103 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 TAF1CQ15572 869 aaPredicted RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 NAA35Q5VZE5 725 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 CDR2LQ86X02 465 aaPredicted RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 GSPT2Q8IYD1 628 aaKnown RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 EIF1ADQ8N9N8 165 aaKnown RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 PDZD7Q9H5P4 517 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 ASB7Q9H672 318 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 GPR25O00155 361 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 SART1O43290 800 aaKnown RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 ITGBL1O95965 494 aaPredicted RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 STAG3L1P0CL83 205 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 CTNNA2P26232 953 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 OAS2P29728 719 aaKnown RBP24.84■■□□□ 1.57
MSX2-201ENST00000239243 MAATS1Q7Z4T9 603 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 CPA5Q8WXQ8 436 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 ALG3Q92685 438 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 CYFIP2Q96F07 1278 aa24.84■■□□□ 1.57
MSX2-201ENST00000239243 A6NJR5 290 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 ERLIN2O94905 339 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 CALCAP01258 141 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 CTNNA1P35221 906 aaKnown RBP24.83■■□□□ 1.57
MSX2-201ENST00000239243 NOMO3P69849 1222 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 NNTQ13423 1086 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 MARCH8Q5T0T0 291 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 MON1BQ7L1V2 547 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 CD101Q93033 1021 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 CAVIN3Q969G5 261 aa24.83■■□□□ 1.57
MSX2-201ENST00000239243 CHORDC1Q9UHD1 332 aaPredicted RBP24.83■■□□□ 1.57
MSX2-201ENST00000239243 IGF2BP3O00425 579 aaKnown RBP eCLIP24.82■■□□□ 1.56
MSX2-201ENST00000239243 ARF4P18085 180 aaPredicted RBP24.82■■□□□ 1.56
MSX2-201ENST00000239243 HSP90B2PQ58FF3 399 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 SEL1L2Q5TEA6 688 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 PHF13Q86YI8 300 aaPredicted RBP24.82■■□□□ 1.56
MSX2-201ENST00000239243 ADPGKQ9BRR6 497 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 MRPL47Q9HD33 250 aaKnown RBP24.82■■□□□ 1.56
MSX2-201ENST00000239243 CISHQ9NSE2 258 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 ANAPC7Q9UJX3 599 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 KAT6AQ92794 2004 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 CHADLQ6NUI6 762 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 PLVAPQ9BX97 442 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 XYLT2Q9H1B5 865 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 MED4Q9NPJ6 270 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 HPCAL4Q9UM19 191 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 PCDHA3Q9Y5H8 950 aa24.82■■□□□ 1.56
MSX2-201ENST00000239243 DYNC1LI2O43237 492 aaPredicted RBP24.81■■□□□ 1.56
MSX2-201ENST00000239243 SLC1A1P43005 524 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 PEX5P50542 639 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 C1QBPQ07021 282 aaKnown RBP24.81■■□□□ 1.56
MSX2-201ENST00000239243 APBB1IPQ7Z5R6 666 aaPredicted RBP24.81■■□□□ 1.56
MSX2-201ENST00000239243 KIAA0319LQ8IZA0 1049 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 ZNF606Q8WXB4 792 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 PPP1R16BQ96T49 567 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 HINFPQ9BQA5 517 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 DDX47Q9H0S4 455 aaKnown RBP24.81■■□□□ 1.56
MSX2-201ENST00000239243 GNEQ9Y223 722 aaKnown RBP24.81■■□□□ 1.56
MSX2-201ENST00000239243 SCINQ9Y6U3 715 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 NRCAMQ92823 1304 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 LSM8O95777 96 aaKnown RBP24.81■■□□□ 1.56
MSX2-201ENST00000239243 RRM1P23921 792 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 SND1Q7KZF4 910 aaKnown RBP eCLIP24.81■■□□□ 1.56
MSX2-201ENST00000239243 ADAM22Q9P0K1 906 aa24.81■■□□□ 1.56
MSX2-201ENST00000239243 ADCY6O43306 1168 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 TSPAN1O60635 241 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 F2P00734 622 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 AARSP49588 968 aaKnown RBP eCLIP24.8■■□□□ 1.56
MSX2-201ENST00000239243 INHBEP58166 350 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 FAM193AP78312 1265 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 CUL1Q13616 776 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 TMEM192Q8IY95 271 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 KRT35Q92764 455 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 CPB2Q96IY4 423 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 NMRK2Q9NPI5 230 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 LACTBL1A8MY62 500 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 CSDE1O75534 798 aaKnown RBP24.8■■□□□ 1.56
MSX2-201ENST00000239243 CD58P19256 250 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 RWDD2BP57060 319 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 ZNF667Q5HYK9 610 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 NT5DC4Q86YG4 428 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 BTBD6Q96KE9 485 aa24.8■■□□□ 1.56
MSX2-201ENST00000239243 A0A1B0GUA9 196 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 MYO1FO00160 1098 aa24.79■■□□□ 1.56
MSX2-201ENST00000239243 KRT19P08727 400 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms