RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FAM213AQ9BRX8 229 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 TARS2Q9BW92 718 aaKnown RBP14.22□□□□□ -0.13
SLIRP-201ENST00000238688 L2HGDHQ9H9P8 463 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 PTPRHQ9HD43 1115 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 RBAKQ9NYW8 714 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-201ENST00000238688 FHOD1Q9Y613 1164 aa14.22□□□□□ -0.13
SLIRP-201ENST00000238688 TISP43B9A030 160 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 EFCAB14O75071 495 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 SRGAP2CP0DJJ0 459 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 TBXAS1P24557 533 aaPredicted RBP14.21□□□□□ -0.13
SLIRP-201ENST00000238688 MATR3P43243 847 aaKnown RBP eCLIP14.21□□□□□ -0.13
SLIRP-201ENST00000238688 HTRA4P83105 476 aaPredicted RBP14.21□□□□□ -0.13
SLIRP-201ENST00000238688 IFI16Q16666 785 aaKnown RBP14.21□□□□□ -0.13
SLIRP-201ENST00000238688 DCAF4L1Q3SXM0 396 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 WDR44Q5JSH3 913 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 IQCEQ6IPM2 695 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 LRRC71Q8N4P6 559 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 MYRIPQ8NFW9 859 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 TRIM58Q8NG06 486 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 ARNTL2Q8WYA1 636 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 TAF4BQ92750 862 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 SAAL1Q96ER3 474 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 RAD9AQ99638 391 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 DESI2Q9BSY9 194 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 IMPG2Q9BZV3 1241 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 IKZF4Q9H2S9 585 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 RAB20Q9NX57 234 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 DNAI1Q9UI46 699 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 DNAJC12Q9UKB3 198 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 AKT3Q9Y243 479 aa14.21□□□□□ -0.13
SLIRP-201ENST00000238688 LINC01553A4QN01 128 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 INO80B-WBP1J3KQ70 363 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 ABLIM1O14639 778 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 FAM189A1O60320 539 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 CASQ1P31415 396 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 GCLMP48507 274 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 CLCN3P51790 818 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 BPIFB4P59827 614 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 GNG11P61952 73 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 DRP2Q13474 957 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 DRAP1Q14919 205 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-201ENST00000238688 CCDC122Q5T0U0 273 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 FAM117BQ6P1L5 589 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 CRELD2Q6UXH1 353 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-201ENST00000238688 SV2AQ7L0J3 742 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 ACRBPQ8NEB7 543 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 NLRP4Q96MN2 994 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 ALS2CR12Q96Q35 445 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 ADPGKQ9BRR6 497 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 TCHPQ9BT92 498 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 GCOM2Q9BZD3 368 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-201ENST00000238688 ASB7Q9H672 318 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 C1orf112Q9NSG2 853 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 ANKFY1Q9P2R3 1169 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 CPSF3Q9UKF6 684 aaKnown RBP14.2□□□□□ -0.14
SLIRP-201ENST00000238688 PCDHA13Q9Y5I0 950 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 COL4A6Q14031 1691 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 MYH10P35580 1976 aa14.2□□□□□ -0.14
SLIRP-201ENST00000238688 A0A0A6YYK5 440 aaPredicted RBP14.19□□□□□ -0.14
SLIRP-201ENST00000238688 CTAGE9A4FU28 777 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 GOLGA8IPA6NC78 632 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 GOLGA8JA6NMD2 632 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 ERLIN2O94905 339 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 CLTAP09496 248 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 TNNI1P19237 187 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 ARHGAP25P42331 645 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 MAGEA1P43355 309 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 ERVK-21P61565 698 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 DLG4P78352 724 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 NAB2Q15742 525 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 ZNF568Q3ZCX4 644 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 SYT10Q6XYQ8 523 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 ZNF677Q86XU0 584 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 KIAA0319LQ8IZA0 1049 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 PLEKHO2Q8TD55 490 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
SLIRP-201ENST00000238688 SHC3Q92529 594 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 SEPT8Q92599 483 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 TOP1MTQ969P6 601 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 CCDC127Q96BQ5 260 aa14.19□□□□□ -0.14
SLIRP-201ENST00000238688 REXO2Q9Y3B8 237 aaKnown RBP14.19□□□□□ -0.14
SLIRP-201ENST00000238688 R3HCC1Q9Y3T6 440 aaKnown RBP14.19□□□□□ -0.14
SLIRP-201ENST00000238688 MUC3AQ02505 3323 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 TACC1O75410 805 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 C4BPAP04003 597 aaKnown RBP14.18□□□□□ -0.14
SLIRP-201ENST00000238688 DLATP10515 647 aaKnown RBP14.18□□□□□ -0.14
SLIRP-201ENST00000238688 NLRP11P59045 1033 aaKnown RBP14.18□□□□□ -0.14
SLIRP-201ENST00000238688 LPIN1Q14693 890 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 DUOXA2Q1HG44 320 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 TJAP1Q5JTD0 557 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 FAM71AQ8IYT1 594 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 TTC39CQ8N584 583 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 TRAPPC12Q8WVT3 735 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 DNAJB3Q8WWF6 145 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 ATXN2LQ8WWM7 1075 aaKnown RBP14.18□□□□□ -0.14
SLIRP-201ENST00000238688 SECISBP2LQ93073 1101 aaKnown RBP14.18□□□□□ -0.14
SLIRP-201ENST00000238688 ZBED2Q9BTP6 218 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 PLEKHA5Q9HAU0 1116 aa14.18□□□□□ -0.14
SLIRP-201ENST00000238688 LZTFL1Q9NQ48 299 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms